Hb_000181_440

Information

Type -
Description -
Location Contig181: 385471-386991
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000181_440 0.0 - - -
2 Hb_028795_010 0.1871493789 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
3 Hb_003096_040 0.1930006959 transcription factor TF Family: HB hypothetical protein POPTR_0005s07290g [Populus trichocarpa]
4 Hb_179679_010 0.2039290982 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Fragaria vesca subsp. vesca]
5 Hb_010261_010 0.2056565175 - - PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Jatropha curcas]
6 Hb_033926_010 0.208946704 - - -
7 Hb_003633_140 0.2240085367 - - PREDICTED: uncharacterized protein LOC105647486 isoform X1 [Jatropha curcas]
8 Hb_015388_030 0.2355809114 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_021576_140 0.2357777655 - - PREDICTED: protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Jatropha curcas]
10 Hb_002316_050 0.2378019096 - - conserved hypothetical protein [Ricinus communis]
11 Hb_049958_010 0.2378264563 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
12 Hb_006269_040 0.2379686739 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
13 Hb_009372_010 0.2411389301 - - -
14 Hb_001514_060 0.24324103 transcription factor TF Family: MYB hypothetical protein JCGZ_16088 [Jatropha curcas]
15 Hb_003914_030 0.2470998684 - - -
16 Hb_007223_010 0.2478056022 - - conserved hypothetical protein [Ricinus communis]
17 Hb_151671_010 0.2482435919 - - hypothetical protein POPTR_0005s04441g [Populus trichocarpa]
18 Hb_012395_080 0.2539209241 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Jatropha curcas]
19 Hb_003060_050 0.2574170852 - - PREDICTED: methyltransferase-like protein 13 [Jatropha curcas]
20 Hb_008616_030 0.2581118395 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000181_440 Hb_000181_440 Hb_028795_010 Hb_028795_010 Hb_000181_440--Hb_028795_010 Hb_003096_040 Hb_003096_040 Hb_000181_440--Hb_003096_040 Hb_179679_010 Hb_179679_010 Hb_000181_440--Hb_179679_010 Hb_010261_010 Hb_010261_010 Hb_000181_440--Hb_010261_010 Hb_033926_010 Hb_033926_010 Hb_000181_440--Hb_033926_010 Hb_003633_140 Hb_003633_140 Hb_000181_440--Hb_003633_140 Hb_028795_010--Hb_003633_140 Hb_009372_010 Hb_009372_010 Hb_028795_010--Hb_009372_010 Hb_002316_050 Hb_002316_050 Hb_028795_010--Hb_002316_050 Hb_018133_030 Hb_018133_030 Hb_028795_010--Hb_018133_030 Hb_000808_070 Hb_000808_070 Hb_028795_010--Hb_000808_070 Hb_004449_050 Hb_004449_050 Hb_028795_010--Hb_004449_050 Hb_031527_070 Hb_031527_070 Hb_003096_040--Hb_031527_070 Hb_003096_040--Hb_010261_010 Hb_153161_010 Hb_153161_010 Hb_003096_040--Hb_153161_010 Hb_000175_350 Hb_000175_350 Hb_003096_040--Hb_000175_350 Hb_178127_010 Hb_178127_010 Hb_003096_040--Hb_178127_010 Hb_005510_010 Hb_005510_010 Hb_003096_040--Hb_005510_010 Hb_006269_040 Hb_006269_040 Hb_179679_010--Hb_006269_040 Hb_049958_010 Hb_049958_010 Hb_179679_010--Hb_049958_010 Hb_079733_010 Hb_079733_010 Hb_179679_010--Hb_079733_010 Hb_179679_010--Hb_003096_040 Hb_003107_020 Hb_003107_020 Hb_179679_010--Hb_003107_020 Hb_010261_010--Hb_003633_140 Hb_003525_020 Hb_003525_020 Hb_010261_010--Hb_003525_020 Hb_012404_040 Hb_012404_040 Hb_010261_010--Hb_012404_040 Hb_000538_190 Hb_000538_190 Hb_010261_010--Hb_000538_190 Hb_001269_040 Hb_001269_040 Hb_010261_010--Hb_001269_040 Hb_005203_050 Hb_005203_050 Hb_033926_010--Hb_005203_050 Hb_007223_010 Hb_007223_010 Hb_033926_010--Hb_007223_010 Hb_009189_030 Hb_009189_030 Hb_033926_010--Hb_009189_030 Hb_033926_010--Hb_009372_010 Hb_082945_020 Hb_082945_020 Hb_033926_010--Hb_082945_020 Hb_002609_090 Hb_002609_090 Hb_003633_140--Hb_002609_090 Hb_003633_140--Hb_002316_050 Hb_001999_250 Hb_001999_250 Hb_003633_140--Hb_001999_250 Hb_007257_050 Hb_007257_050 Hb_003633_140--Hb_007257_050 Hb_031089_030 Hb_031089_030 Hb_003633_140--Hb_031089_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.36312 27.5918 2.91148 5.95739 19.3599 10.3856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.115259 0.0905669 0 4.74408 0.51793

CAGE analysis