Hb_002929_130

Information

Type -
Description -
Location Contig2929: 67078-69127
Sequence    

Annotation

kegg
ID rcu:RCOM_1487750
description phosphofructokinase, putative (EC:2.7.1.90)
nr
ID AIE47274.1
description phosphofructokinase [Hevea brasiliensis]
swissprot
ID Q94AA4
description ATP-dependent 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1
trembl
ID A0A068LJB7
description ATP-dependent 6-phosphofructokinase OS=Hevea brasiliensis GN=PFK5 PE=2 SV=1
Gene Ontology
ID GO:0005737
description atp-dependent 6-phosphofructokinase 6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002929_130 0.0 - - phosphofructokinase [Hevea brasiliensis]
2 Hb_100964_010 0.1612673333 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_029921_020 0.2206326871 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
4 Hb_000256_210 0.2244513411 - - PREDICTED: 40S ribosomal protein S11-like [Phoenix dactylifera]
5 Hb_089140_060 0.2345548409 - - Uncharacterized protein TCM_037529 [Theobroma cacao]
6 Hb_007603_020 0.2441955238 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
7 Hb_026206_020 0.2473000139 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X1 [Jatropha curcas]
8 Hb_006831_100 0.2493072347 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
9 Hb_000733_040 0.2511073507 - - hypothetical protein POPTR_0010s20310g [Populus trichocarpa]
10 Hb_000465_120 0.251206339 - - PREDICTED: uncharacterized protein LOC105632294 [Jatropha curcas]
11 Hb_007333_030 0.2520477205 - - -
12 Hb_002035_090 0.2523157376 - - -
13 Hb_000260_690 0.2560085217 - - disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula]
14 Hb_006960_020 0.2564165952 - - PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
15 Hb_005322_030 0.2568994505 - - PREDICTED: rRNA-processing protein UTP23 homolog [Jatropha curcas]
16 Hb_002831_040 0.2617444547 - - PREDICTED: fatty acid amide hydrolase-like [Jatropha curcas]
17 Hb_007765_060 0.2641865919 - - Proliferating cell nuclear antigen [Theobroma cacao]
18 Hb_054436_010 0.2669472818 - - PREDICTED: uncharacterized protein LOC105638666 [Jatropha curcas]
19 Hb_063409_020 0.2674896221 - - Calcium-binding protein, putative [Ricinus communis]
20 Hb_114984_010 0.2690380435 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002929_130 Hb_002929_130 Hb_100964_010 Hb_100964_010 Hb_002929_130--Hb_100964_010 Hb_029921_020 Hb_029921_020 Hb_002929_130--Hb_029921_020 Hb_000256_210 Hb_000256_210 Hb_002929_130--Hb_000256_210 Hb_089140_060 Hb_089140_060 Hb_002929_130--Hb_089140_060 Hb_007603_020 Hb_007603_020 Hb_002929_130--Hb_007603_020 Hb_026206_020 Hb_026206_020 Hb_002929_130--Hb_026206_020 Hb_002035_090 Hb_002035_090 Hb_100964_010--Hb_002035_090 Hb_100964_010--Hb_007603_020 Hb_114984_010 Hb_114984_010 Hb_100964_010--Hb_114984_010 Hb_138600_010 Hb_138600_010 Hb_100964_010--Hb_138600_010 Hb_050686_010 Hb_050686_010 Hb_100964_010--Hb_050686_010 Hb_029921_020--Hb_026206_020 Hb_021420_010 Hb_021420_010 Hb_029921_020--Hb_021420_010 Hb_007810_100 Hb_007810_100 Hb_029921_020--Hb_007810_100 Hb_000179_200 Hb_000179_200 Hb_029921_020--Hb_000179_200 Hb_000566_100 Hb_000566_100 Hb_029921_020--Hb_000566_100 Hb_000100_130 Hb_000100_130 Hb_029921_020--Hb_000100_130 Hb_002159_030 Hb_002159_030 Hb_000256_210--Hb_002159_030 Hb_002159_040 Hb_002159_040 Hb_000256_210--Hb_002159_040 Hb_000441_160 Hb_000441_160 Hb_000256_210--Hb_000441_160 Hb_004920_060 Hb_004920_060 Hb_000256_210--Hb_004920_060 Hb_005322_030 Hb_005322_030 Hb_000256_210--Hb_005322_030 Hb_001196_070 Hb_001196_070 Hb_000256_210--Hb_001196_070 Hb_000733_040 Hb_000733_040 Hb_089140_060--Hb_000733_040 Hb_001377_050 Hb_001377_050 Hb_089140_060--Hb_001377_050 Hb_000815_100 Hb_000815_100 Hb_089140_060--Hb_000815_100 Hb_089140_060--Hb_002035_090 Hb_040506_010 Hb_040506_010 Hb_089140_060--Hb_040506_010 Hb_007603_020--Hb_002035_090 Hb_001767_040 Hb_001767_040 Hb_007603_020--Hb_001767_040 Hb_000181_410 Hb_000181_410 Hb_007603_020--Hb_000181_410 Hb_001622_010 Hb_001622_010 Hb_007603_020--Hb_001622_010 Hb_000165_140 Hb_000165_140 Hb_007603_020--Hb_000165_140 Hb_006649_080 Hb_006649_080 Hb_026206_020--Hb_006649_080 Hb_033187_050 Hb_033187_050 Hb_026206_020--Hb_033187_050 Hb_009620_030 Hb_009620_030 Hb_026206_020--Hb_009620_030 Hb_000479_150 Hb_000479_150 Hb_026206_020--Hb_000479_150 Hb_011218_070 Hb_011218_070 Hb_026206_020--Hb_011218_070 Hb_008554_120 Hb_008554_120 Hb_026206_020--Hb_008554_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.43156 0.174628 0.830639 0.188772 0.950572 1.00039
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.604045 0.156256 0.0671953

CAGE analysis