Hb_033623_040

Information

Type -
Description -
Location Contig33623: 64045-65798
Sequence    

Annotation

kegg
ID mtr:MTR_6g026690
description hypothetical protein
nr
ID BAJ53217.1
description JHL22C18.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUA7
description JHL22C18.10 protein OS=Jatropha curcas GN=JHL22C18.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033623_040 0.0 - - JHL22C18.10 [Jatropha curcas]
2 Hb_002493_010 0.1518914899 - - -
3 Hb_002122_020 0.213840937 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
4 Hb_017184_010 0.2269259627 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
5 Hb_001952_080 0.2269260859 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
6 Hb_004989_010 0.2269261047 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
7 Hb_039316_010 0.2269261638 - - PREDICTED: uncharacterized protein LOC105771917 [Gossypium raimondii]
8 Hb_008601_020 0.2269261841 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_004019_060 0.2269261943 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
10 Hb_113614_010 0.2269262123 - - hypothetical protein VITISV_001308 [Vitis vinifera]
11 Hb_004078_030 0.2269262315 - - Putative polyprotein, identical [Solanum demissum]
12 Hb_000029_430 0.226926334 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Jatropha curcas]
13 Hb_181107_010 0.2269271131 - - hypothetical protein, partial [Pseudomonas tolaasii]
14 Hb_001168_090 0.2269282453 - - PREDICTED: uncharacterized protein LOC104246050 [Nicotiana sylvestris]
15 Hb_009577_010 0.2269293465 - - -
16 Hb_026405_010 0.2269295977 - - PREDICTED: uncharacterized protein LOC104107896 [Nicotiana tomentosiformis]
17 Hb_089844_010 0.2269308597 - - -
18 Hb_000110_110 0.2269329063 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
19 Hb_028998_010 0.2269449003 - - -
20 Hb_001369_430 0.2269536406 - - PREDICTED: uncharacterized protein LOC105648869 [Jatropha curcas]

Gene co-expression network

sample Hb_033623_040 Hb_033623_040 Hb_002493_010 Hb_002493_010 Hb_033623_040--Hb_002493_010 Hb_002122_020 Hb_002122_020 Hb_033623_040--Hb_002122_020 Hb_017184_010 Hb_017184_010 Hb_033623_040--Hb_017184_010 Hb_001952_080 Hb_001952_080 Hb_033623_040--Hb_001952_080 Hb_004989_010 Hb_004989_010 Hb_033623_040--Hb_004989_010 Hb_039316_010 Hb_039316_010 Hb_033623_040--Hb_039316_010 Hb_132384_010 Hb_132384_010 Hb_002493_010--Hb_132384_010 Hb_002493_010--Hb_002122_020 Hb_001300_250 Hb_001300_250 Hb_002493_010--Hb_001300_250 Hb_138585_020 Hb_138585_020 Hb_002493_010--Hb_138585_020 Hb_088410_010 Hb_088410_010 Hb_002493_010--Hb_088410_010 Hb_002122_020--Hb_088410_010 Hb_002473_140 Hb_002473_140 Hb_002122_020--Hb_002473_140 Hb_006157_050 Hb_006157_050 Hb_002122_020--Hb_006157_050 Hb_065943_010 Hb_065943_010 Hb_002122_020--Hb_065943_010 Hb_011478_010 Hb_011478_010 Hb_002122_020--Hb_011478_010 Hb_017184_010--Hb_001952_080 Hb_017184_010--Hb_039316_010 Hb_113614_010 Hb_113614_010 Hb_017184_010--Hb_113614_010 Hb_000029_430 Hb_000029_430 Hb_017184_010--Hb_000029_430 Hb_181107_010 Hb_181107_010 Hb_017184_010--Hb_181107_010 Hb_017184_010--Hb_004989_010 Hb_001952_080--Hb_039316_010 Hb_001952_080--Hb_113614_010 Hb_001952_080--Hb_000029_430 Hb_001952_080--Hb_181107_010 Hb_001952_080--Hb_004989_010 Hb_008601_020 Hb_008601_020 Hb_004989_010--Hb_008601_020 Hb_004019_060 Hb_004019_060 Hb_004989_010--Hb_004019_060 Hb_004078_030 Hb_004078_030 Hb_004989_010--Hb_004078_030 Hb_004989_010--Hb_039316_010 Hb_039316_010--Hb_113614_010 Hb_039316_010--Hb_000029_430 Hb_039316_010--Hb_181107_010 Hb_001168_090 Hb_001168_090 Hb_039316_010--Hb_001168_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.010448 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0448622 0 0.0499587

CAGE analysis