Hb_143714_010

Information

Type -
Description -
Location Contig143714: 642-1570
Sequence    

Annotation

kegg
ID pop:POPTR_0004s10320g
description hypothetical protein
nr
ID XP_011012668.1
description PREDICTED: phenolic glucoside malonyltransferase 1-like [Populus euphratica]
swissprot
ID Q9LRQ8
description Phenolic glucoside malonyltransferase 2 OS=Arabidopsis thaliana GN=PMAT2 PE=1 SV=1
trembl
ID U5GI92
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s10320g PE=4 SV=1
Gene Ontology
ID GO:0016740
description phenolic glucoside malonyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_143714_010 0.0 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Populus euphratica]
2 Hb_000710_090 0.178187987 - - PREDICTED: uncharacterized protein LOC104583249 [Brachypodium distachyon]
3 Hb_008453_130 0.3092082718 - - hypothetical protein JCGZ_08179 [Jatropha curcas]
4 Hb_003994_310 0.3145479685 transcription factor TF Family: PHD conserved hypothetical protein [Ricinus communis]
5 Hb_011671_190 0.3514184215 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
6 Hb_001587_170 0.3582190479 - - hypothetical protein B456_010G223200, partial [Gossypium raimondii]
7 Hb_000049_220 0.3608771192 - - ammonium transporter, putative [Ricinus communis]
8 Hb_003020_060 0.3629080219 - - PREDICTED: low-temperature-induced 65 kDa protein [Jatropha curcas]
9 Hb_002928_040 0.372248738 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
10 Hb_004143_030 0.3727002005 - - PREDICTED: chromosome-associated kinesin KIF4B [Jatropha curcas]
11 Hb_087203_010 0.3798308326 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 68-like [Pyrus x bretschneideri]
12 Hb_096077_010 0.3876641513 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
13 Hb_003786_080 0.3897577707 - - electron transporter, putative [Ricinus communis]
14 Hb_001546_160 0.3933668119 - - ankyrin repeat-containing protein, putative [Ricinus communis]
15 Hb_000699_100 0.3941248667 - - PREDICTED: pentatricopeptide repeat-containing protein At2g01510, mitochondrial-like [Jatropha curcas]
16 Hb_000366_010 0.395103128 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like, partial [Pyrus x bretschneideri]
17 Hb_000424_040 0.3972827 - - PREDICTED: uncharacterized protein LOC105638080 [Jatropha curcas]
18 Hb_002493_010 0.3977542681 - - -
19 Hb_092703_010 0.4021677241 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
20 Hb_000312_050 0.4056865707 - - transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_143714_010 Hb_143714_010 Hb_000710_090 Hb_000710_090 Hb_143714_010--Hb_000710_090 Hb_008453_130 Hb_008453_130 Hb_143714_010--Hb_008453_130 Hb_003994_310 Hb_003994_310 Hb_143714_010--Hb_003994_310 Hb_011671_190 Hb_011671_190 Hb_143714_010--Hb_011671_190 Hb_001587_170 Hb_001587_170 Hb_143714_010--Hb_001587_170 Hb_000049_220 Hb_000049_220 Hb_143714_010--Hb_000049_220 Hb_003020_060 Hb_003020_060 Hb_000710_090--Hb_003020_060 Hb_000710_090--Hb_011671_190 Hb_000710_090--Hb_008453_130 Hb_003786_080 Hb_003786_080 Hb_000710_090--Hb_003786_080 Hb_000424_040 Hb_000424_040 Hb_000710_090--Hb_000424_040 Hb_001546_160 Hb_001546_160 Hb_008453_130--Hb_001546_160 Hb_000025_610 Hb_000025_610 Hb_008453_130--Hb_000025_610 Hb_000413_290 Hb_000413_290 Hb_008453_130--Hb_000413_290 Hb_087203_010 Hb_087203_010 Hb_008453_130--Hb_087203_010 Hb_003994_310--Hb_011671_190 Hb_002290_020 Hb_002290_020 Hb_003994_310--Hb_002290_020 Hb_002928_040 Hb_002928_040 Hb_003994_310--Hb_002928_040 Hb_003994_310--Hb_000710_090 Hb_000516_050 Hb_000516_050 Hb_003994_310--Hb_000516_050 Hb_011671_190--Hb_000424_040 Hb_092703_010 Hb_092703_010 Hb_011671_190--Hb_092703_010 Hb_000699_100 Hb_000699_100 Hb_011671_190--Hb_000699_100 Hb_009851_010 Hb_009851_010 Hb_011671_190--Hb_009851_010 Hb_169209_010 Hb_169209_010 Hb_011671_190--Hb_169209_010 Hb_000809_240 Hb_000809_240 Hb_011671_190--Hb_000809_240 Hb_000367_250 Hb_000367_250 Hb_001587_170--Hb_000367_250 Hb_003164_010 Hb_003164_010 Hb_001587_170--Hb_003164_010 Hb_001728_120 Hb_001728_120 Hb_001587_170--Hb_001728_120 Hb_001300_250 Hb_001300_250 Hb_001587_170--Hb_001300_250 Hb_001959_090 Hb_001959_090 Hb_001587_170--Hb_001959_090 Hb_000454_040 Hb_000454_040 Hb_001587_170--Hb_000454_040 Hb_004143_030 Hb_004143_030 Hb_000049_220--Hb_004143_030 Hb_007504_030 Hb_007504_030 Hb_000049_220--Hb_007504_030 Hb_134546_010 Hb_134546_010 Hb_000049_220--Hb_134546_010 Hb_001257_150 Hb_001257_150 Hb_000049_220--Hb_001257_150 Hb_027380_240 Hb_027380_240 Hb_000049_220--Hb_027380_240 Hb_000189_400 Hb_000189_400 Hb_000049_220--Hb_000189_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.098379 0 0.237998 0 0 0.0800609
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.155431 0 0.17179

CAGE analysis