Hb_002928_040

Information

Type -
Description -
Location Contig2928: 23456-24799
Sequence    

Annotation

kegg
ID rcu:RCOM_1600120
description Anthranilate N-benzoyltransferase protein, putative (EC:2.3.1.150)
nr
ID XP_012073874.1
description PREDICTED: vinorine synthase-like [Jatropha curcas]
swissprot
ID Q70PR7
description Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2
trembl
ID A0A067KL32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08113 PE=4 SV=1
Gene Ontology
ID GO:0047180
description vinorine synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30683: 24389-24707
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002928_040 0.0 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
2 Hb_005271_160 0.2131618683 - - PREDICTED: uncharacterized protein LOC105645844 [Jatropha curcas]
3 Hb_000016_310 0.220210278 - - protein binding protein, putative [Ricinus communis]
4 Hb_000690_060 0.2389074228 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Populus euphratica]
5 Hb_002105_010 0.2444881359 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001232_150 0.2449323347 - - PREDICTED: MAR-binding filament-like protein 1-1 [Jatropha curcas]
7 Hb_000023_370 0.2456125744 - - -
8 Hb_000676_060 0.2474675633 - - Sec14 cytosolic factor, putative [Ricinus communis]
9 Hb_006911_070 0.2494940836 - - 50S ribosomal protein L1p, putative [Ricinus communis]
10 Hb_007576_070 0.2498868671 - - PREDICTED: uncharacterized protein LOC105640040 isoform X3 [Jatropha curcas]
11 Hb_000011_240 0.2509265095 - - PREDICTED: uncharacterized protein LOC105631316 [Jatropha curcas]
12 Hb_004116_160 0.2516446575 - - PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Jatropha curcas]
13 Hb_000140_440 0.2571387904 - - PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Jatropha curcas]
14 Hb_003025_140 0.257182547 - - conserved hypothetical protein [Ricinus communis]
15 Hb_066967_020 0.257633203 - - RAB6-interacting protein, putative [Ricinus communis]
16 Hb_008092_050 0.2580196206 - - PREDICTED: uncharacterized protein LOC105142434 [Populus euphratica]
17 Hb_002027_090 0.2629509709 - - -
18 Hb_000025_610 0.2629677274 - - annexin, putative [Ricinus communis]
19 Hb_002150_140 0.2649457763 - - PREDICTED: girdin-like [Jatropha curcas]
20 Hb_006816_180 0.2650720617 - - -

Gene co-expression network

sample Hb_002928_040 Hb_002928_040 Hb_005271_160 Hb_005271_160 Hb_002928_040--Hb_005271_160 Hb_000016_310 Hb_000016_310 Hb_002928_040--Hb_000016_310 Hb_000690_060 Hb_000690_060 Hb_002928_040--Hb_000690_060 Hb_002105_010 Hb_002105_010 Hb_002928_040--Hb_002105_010 Hb_001232_150 Hb_001232_150 Hb_002928_040--Hb_001232_150 Hb_000023_370 Hb_000023_370 Hb_002928_040--Hb_000023_370 Hb_008206_060 Hb_008206_060 Hb_005271_160--Hb_008206_060 Hb_065525_130 Hb_065525_130 Hb_005271_160--Hb_065525_130 Hb_008092_050 Hb_008092_050 Hb_005271_160--Hb_008092_050 Hb_003900_030 Hb_003900_030 Hb_005271_160--Hb_003900_030 Hb_012098_150 Hb_012098_150 Hb_005271_160--Hb_012098_150 Hb_001959_240 Hb_001959_240 Hb_005271_160--Hb_001959_240 Hb_002915_010 Hb_002915_010 Hb_000016_310--Hb_002915_010 Hb_000680_010 Hb_000680_010 Hb_000016_310--Hb_000680_010 Hb_003883_010 Hb_003883_010 Hb_000016_310--Hb_003883_010 Hb_002107_050 Hb_002107_050 Hb_000016_310--Hb_002107_050 Hb_000676_060 Hb_000676_060 Hb_000016_310--Hb_000676_060 Hb_001021_210 Hb_001021_210 Hb_000016_310--Hb_001021_210 Hb_000976_190 Hb_000976_190 Hb_000690_060--Hb_000976_190 Hb_001220_050 Hb_001220_050 Hb_000690_060--Hb_001220_050 Hb_000878_030 Hb_000878_030 Hb_000690_060--Hb_000878_030 Hb_001723_030 Hb_001723_030 Hb_000690_060--Hb_001723_030 Hb_000690_060--Hb_000023_370 Hb_000537_070 Hb_000537_070 Hb_000690_060--Hb_000537_070 Hb_002105_010--Hb_012098_150 Hb_004116_160 Hb_004116_160 Hb_002105_010--Hb_004116_160 Hb_002105_010--Hb_000676_060 Hb_066967_020 Hb_066967_020 Hb_002105_010--Hb_066967_020 Hb_006326_050 Hb_006326_050 Hb_002105_010--Hb_006326_050 Hb_002105_010--Hb_005271_160 Hb_021650_010 Hb_021650_010 Hb_001232_150--Hb_021650_010 Hb_000445_070 Hb_000445_070 Hb_001232_150--Hb_000445_070 Hb_000051_060 Hb_000051_060 Hb_001232_150--Hb_000051_060 Hb_000640_160 Hb_000640_160 Hb_001232_150--Hb_000640_160 Hb_003225_020 Hb_003225_020 Hb_001232_150--Hb_003225_020 Hb_005731_110 Hb_005731_110 Hb_001232_150--Hb_005731_110 Hb_001907_070 Hb_001907_070 Hb_000023_370--Hb_001907_070 Hb_002053_110 Hb_002053_110 Hb_000023_370--Hb_002053_110 Hb_000363_060 Hb_000363_060 Hb_000023_370--Hb_000363_060 Hb_000023_370--Hb_001220_050 Hb_006911_070 Hb_006911_070 Hb_000023_370--Hb_006911_070 Hb_005618_150 Hb_005618_150 Hb_000023_370--Hb_005618_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.116177 0.05681 0.177091 0.0464138 0.0301591 0.0772934
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0279087 0.0521983 0 0.174298

CAGE analysis