Hb_007477_030

Information

Type -
Description -
Location Contig7477: 36566-42531
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa012249mg
description hypothetical protein
nr
ID XP_012085184.1
description PREDICTED: monothiol glutaredoxin-S10-like [Jatropha curcas]
swissprot
ID Q8GWS0
description Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana GN=GRXC5 PE=1 SV=1
trembl
ID A0A067JUF4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17596 PE=4 SV=1
Gene Ontology
ID GO:0005623
description glutaredoxin family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56707: 40604-42504 , PASA_asmbl_56708: 36565-38221 , PASA_asmbl_56709: 36569-42255
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007477_030 0.0 - - PREDICTED: monothiol glutaredoxin-S10-like [Jatropha curcas]
2 Hb_005064_010 0.1351438623 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
3 Hb_002284_210 0.1413047484 - - PREDICTED: protein canopy-1 [Jatropha curcas]
4 Hb_004064_040 0.1422390686 - - PREDICTED: Down syndrome critical region protein 3 homolog isoform X3 [Jatropha curcas]
5 Hb_000072_300 0.1426624722 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
6 Hb_000154_050 0.1444922435 - - CMP-sialic acid transporter, putative [Ricinus communis]
7 Hb_000215_090 0.1492466239 - - cytochrome b5 domain-containing family protein [Populus trichocarpa]
8 Hb_000152_600 0.1502063408 - - PREDICTED: protein jagunal homolog 1 [Jatropha curcas]
9 Hb_000359_290 0.1509710553 - - Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis]
10 Hb_001519_040 0.1522842558 - - PREDICTED: uncharacterized protein LOC105636007 [Jatropha curcas]
11 Hb_002740_080 0.1523940801 - - flap endonuclease-1, putative [Ricinus communis]
12 Hb_004357_050 0.1526371393 - - PREDICTED: histone deacetylase HDT1-like [Jatropha curcas]
13 Hb_001085_260 0.1545275571 - - PREDICTED: uncharacterized protein LOC105633184 [Jatropha curcas]
14 Hb_004055_050 0.1548509335 - - PREDICTED: coatomer subunit zeta-1-like [Jatropha curcas]
15 Hb_002471_250 0.1555285661 - - Tapt1/CMV receptor, putative isoform 2 [Theobroma cacao]
16 Hb_002686_080 0.1562225503 transcription factor TF Family: PHD PREDICTED: PHD finger protein ING2-like [Jatropha curcas]
17 Hb_000228_060 0.1567446833 - - hypothetical protein JCGZ_21532 [Jatropha curcas]
18 Hb_003760_030 0.1570536522 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
19 Hb_003540_050 0.1575116637 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
20 Hb_001227_120 0.1589247453 transcription factor TF Family: C2H2 Histone deacetylase 2a, putative [Ricinus communis]

Gene co-expression network

sample Hb_007477_030 Hb_007477_030 Hb_005064_010 Hb_005064_010 Hb_007477_030--Hb_005064_010 Hb_002284_210 Hb_002284_210 Hb_007477_030--Hb_002284_210 Hb_004064_040 Hb_004064_040 Hb_007477_030--Hb_004064_040 Hb_000072_300 Hb_000072_300 Hb_007477_030--Hb_000072_300 Hb_000154_050 Hb_000154_050 Hb_007477_030--Hb_000154_050 Hb_000215_090 Hb_000215_090 Hb_007477_030--Hb_000215_090 Hb_005064_010--Hb_004064_040 Hb_005064_010--Hb_000154_050 Hb_001002_060 Hb_001002_060 Hb_005064_010--Hb_001002_060 Hb_001227_120 Hb_001227_120 Hb_005064_010--Hb_001227_120 Hb_003540_050 Hb_003540_050 Hb_005064_010--Hb_003540_050 Hb_000160_070 Hb_000160_070 Hb_005064_010--Hb_000160_070 Hb_006816_100 Hb_006816_100 Hb_002284_210--Hb_006816_100 Hb_003760_030 Hb_003760_030 Hb_002284_210--Hb_003760_030 Hb_002874_180 Hb_002874_180 Hb_002284_210--Hb_002874_180 Hb_010098_020 Hb_010098_020 Hb_002284_210--Hb_010098_020 Hb_143766_020 Hb_143766_020 Hb_002284_210--Hb_143766_020 Hb_002686_080 Hb_002686_080 Hb_002284_210--Hb_002686_080 Hb_000836_300 Hb_000836_300 Hb_004064_040--Hb_000836_300 Hb_000903_010 Hb_000903_010 Hb_004064_040--Hb_000903_010 Hb_004064_040--Hb_000160_070 Hb_000056_160 Hb_000056_160 Hb_004064_040--Hb_000056_160 Hb_004064_040--Hb_001227_120 Hb_000072_300--Hb_003540_050 Hb_002740_080 Hb_002740_080 Hb_000072_300--Hb_002740_080 Hb_000359_290 Hb_000359_290 Hb_000072_300--Hb_000359_290 Hb_000072_300--Hb_002686_080 Hb_000072_300--Hb_005064_010 Hb_000152_600 Hb_000152_600 Hb_000072_300--Hb_000152_600 Hb_006588_160 Hb_006588_160 Hb_000154_050--Hb_006588_160 Hb_004013_030 Hb_004013_030 Hb_000154_050--Hb_004013_030 Hb_002837_040 Hb_002837_040 Hb_000154_050--Hb_002837_040 Hb_002871_140 Hb_002871_140 Hb_000154_050--Hb_002871_140 Hb_000261_210 Hb_000261_210 Hb_000154_050--Hb_000261_210 Hb_032202_100 Hb_032202_100 Hb_000215_090--Hb_032202_100 Hb_004357_050 Hb_004357_050 Hb_000215_090--Hb_004357_050 Hb_000130_270 Hb_000130_270 Hb_000215_090--Hb_000130_270 Hb_002471_250 Hb_002471_250 Hb_000215_090--Hb_002471_250 Hb_005288_130 Hb_005288_130 Hb_000215_090--Hb_005288_130 Hb_003207_180 Hb_003207_180 Hb_000215_090--Hb_003207_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.59334 2.15583 10.8423 10.6543 2.62429 5.17978
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.65281 5.9612 1.14742 4.20996 5.00712

CAGE analysis