Hb_004724_470

Information

Type -
Description -
Location Contig4724: 293311-294841
Sequence    

Annotation

kegg
ID rcu:RCOM_1282320
description Nitrilase, putative (EC:3.5.5.1)
nr
ID XP_002523857.1
description Nitrilase, putative [Ricinus communis]
swissprot
ID Q42966
description Bifunctional nitrilase/nitrile hydratase NIT4B OS=Nicotiana tabacum GN=NIT4B PE=2 SV=1
trembl
ID B9SCY8
description Nitrilase, putative OS=Ricinus communis GN=RCOM_1282320 PE=4 SV=1
Gene Ontology
ID GO:0016810
description bifunctional nitrilase nitrile hydratase nit4a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004724_470 0.0 - - Nitrilase, putative [Ricinus communis]
2 Hb_007765_070 0.1613670446 - - PREDICTED: mitochondrial uncoupling protein 2 [Jatropha curcas]
3 Hb_000203_230 0.1697525507 - - PREDICTED: probable inactive dual specificity protein phosphatase-like At4g18593 [Jatropha curcas]
4 Hb_083641_010 0.1730096124 - - SECY isoform 1 [Theobroma cacao]
5 Hb_004445_040 0.1786999161 - - PREDICTED: uncharacterized protein LOC105639134 isoform X5 [Jatropha curcas]
6 Hb_000094_290 0.1918731692 - - PREDICTED: outer envelope pore protein 24B, chloroplastic-like [Jatropha curcas]
7 Hb_010003_010 0.200583782 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
8 Hb_028227_010 0.2026055095 - - PREDICTED: uncharacterized protein LOC105629489 [Jatropha curcas]
9 Hb_074449_010 0.2060538414 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
10 Hb_002079_030 0.2075178759 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
11 Hb_050912_010 0.2119983071 - - PREDICTED: amidase 1-like isoform X2 [Jatropha curcas]
12 Hb_001141_410 0.2131283097 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
13 Hb_000270_870 0.2134663913 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
14 Hb_002400_330 0.2141138423 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X2 [Jatropha curcas]
15 Hb_013358_080 0.2148869604 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Jatropha curcas]
16 Hb_004374_080 0.21501466 - - PREDICTED: uncharacterized protein LOC105645766 [Jatropha curcas]
17 Hb_000071_150 0.2155151513 - - Stearoy-ACP desaturase [Ricinus communis]
18 Hb_003376_050 0.2156698656 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
19 Hb_001776_030 0.2160673666 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001488_340 0.2162124459 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]

Gene co-expression network

sample Hb_004724_470 Hb_004724_470 Hb_007765_070 Hb_007765_070 Hb_004724_470--Hb_007765_070 Hb_000203_230 Hb_000203_230 Hb_004724_470--Hb_000203_230 Hb_083641_010 Hb_083641_010 Hb_004724_470--Hb_083641_010 Hb_004445_040 Hb_004445_040 Hb_004724_470--Hb_004445_040 Hb_000094_290 Hb_000094_290 Hb_004724_470--Hb_000094_290 Hb_010003_010 Hb_010003_010 Hb_004724_470--Hb_010003_010 Hb_008511_060 Hb_008511_060 Hb_007765_070--Hb_008511_060 Hb_000270_870 Hb_000270_870 Hb_007765_070--Hb_000270_870 Hb_048476_150 Hb_048476_150 Hb_007765_070--Hb_048476_150 Hb_024836_010 Hb_024836_010 Hb_007765_070--Hb_024836_010 Hb_002471_180 Hb_002471_180 Hb_007765_070--Hb_002471_180 Hb_002769_020 Hb_002769_020 Hb_000203_230--Hb_002769_020 Hb_000700_150 Hb_000700_150 Hb_000203_230--Hb_000700_150 Hb_002079_030 Hb_002079_030 Hb_000203_230--Hb_002079_030 Hb_001141_410 Hb_001141_410 Hb_000203_230--Hb_001141_410 Hb_004724_460 Hb_004724_460 Hb_000203_230--Hb_004724_460 Hb_000948_170 Hb_000948_170 Hb_000203_230--Hb_000948_170 Hb_142328_010 Hb_142328_010 Hb_083641_010--Hb_142328_010 Hb_083641_010--Hb_002079_030 Hb_050912_010 Hb_050912_010 Hb_083641_010--Hb_050912_010 Hb_010998_030 Hb_010998_030 Hb_083641_010--Hb_010998_030 Hb_005048_140 Hb_005048_140 Hb_083641_010--Hb_005048_140 Hb_005608_030 Hb_005608_030 Hb_004445_040--Hb_005608_030 Hb_005078_010 Hb_005078_010 Hb_004445_040--Hb_005078_010 Hb_002174_050 Hb_002174_050 Hb_004445_040--Hb_002174_050 Hb_004060_030 Hb_004060_030 Hb_004445_040--Hb_004060_030 Hb_013691_020 Hb_013691_020 Hb_004445_040--Hb_013691_020 Hb_010565_010 Hb_010565_010 Hb_004445_040--Hb_010565_010 Hb_000173_060 Hb_000173_060 Hb_000094_290--Hb_000173_060 Hb_000300_090 Hb_000300_090 Hb_000094_290--Hb_000300_090 Hb_000622_350 Hb_000622_350 Hb_000094_290--Hb_000622_350 Hb_000889_100 Hb_000889_100 Hb_000094_290--Hb_000889_100 Hb_011926_040 Hb_011926_040 Hb_000094_290--Hb_011926_040 Hb_000094_290--Hb_010003_010 Hb_010003_010--Hb_000889_100 Hb_000077_290 Hb_000077_290 Hb_010003_010--Hb_000077_290 Hb_000230_180 Hb_000230_180 Hb_010003_010--Hb_000230_180 Hb_051257_010 Hb_051257_010 Hb_010003_010--Hb_051257_010 Hb_005170_010 Hb_005170_010 Hb_010003_010--Hb_005170_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.81024 0.123969 0.742502 1.18379 0.269091 1.68595
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.168407 0.132277 0.217286 0.167496 0.717453

CAGE analysis