Hb_004650_030

Information

Type -
Description -
Location Contig4650: 42173-48322
Sequence    

Annotation

kegg
ID rcu:RCOM_1032370
description dual specificity protein kinase-ttk, putative (EC:2.7.12.2)
nr
ID XP_012078169.1
description PREDICTED: uncharacterized protein LOC105638888 isoform X1 [Jatropha curcas]
swissprot
ID O94235
description Serine/threonine-protein kinase mph1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mph1 PE=2 SV=1
trembl
ID A0A067KLU8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12051 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase mps1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004650_030 0.0 - - PREDICTED: uncharacterized protein LOC105638888 isoform X1 [Jatropha curcas]
2 Hb_001401_040 0.1196193574 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
3 Hb_000108_240 0.1416312514 - - hypothetical protein Csa_1G600150 [Cucumis sativus]
4 Hb_000260_040 0.1431495678 - - PREDICTED: uncharacterized protein LOC105649093 [Jatropha curcas]
5 Hb_004531_080 0.1440630634 - - hypothetical protein RCOM_1491960 [Ricinus communis]
6 Hb_001377_530 0.1512385246 - - NC domain-containing family protein [Populus trichocarpa]
7 Hb_010172_110 0.1548485491 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
8 Hb_001408_170 0.1596367111 - - PREDICTED: phosphoglycolate phosphatase 2 [Jatropha curcas]
9 Hb_000331_350 0.1600167481 - - hypothetical protein JCGZ_11337 [Jatropha curcas]
10 Hb_000406_030 0.163745879 - - Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Morus notabilis]
11 Hb_004195_140 0.1640662927 - - Sec14 cytosolic factor, putative [Ricinus communis]
12 Hb_000300_100 0.1641735383 - - NADH-cytochrome b5 reductase 1 [Morus notabilis]
13 Hb_005504_040 0.1662979554 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003784_040 0.171300431 - - Afadin- and alpha-actinin-binding protein, putative [Ricinus communis]
15 Hb_000500_340 0.1736894271 - - PREDICTED: exonuclease 1 [Jatropha curcas]
16 Hb_000172_090 0.1779248176 - - PREDICTED: uncharacterized protein LOC105650755 [Jatropha curcas]
17 Hb_007002_040 0.1793843021 transcription factor TF Family: PHD DNA replication regulator dpb11, putative [Ricinus communis]
18 Hb_003408_010 0.1802569903 - - fructokinase [Manihot esculenta]
19 Hb_006970_130 0.1806651577 - - PREDICTED: histone H3.3-like [Colobus angolensis palliatus]
20 Hb_000139_280 0.1813391951 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004650_030 Hb_004650_030 Hb_001401_040 Hb_001401_040 Hb_004650_030--Hb_001401_040 Hb_000108_240 Hb_000108_240 Hb_004650_030--Hb_000108_240 Hb_000260_040 Hb_000260_040 Hb_004650_030--Hb_000260_040 Hb_004531_080 Hb_004531_080 Hb_004650_030--Hb_004531_080 Hb_001377_530 Hb_001377_530 Hb_004650_030--Hb_001377_530 Hb_010172_110 Hb_010172_110 Hb_004650_030--Hb_010172_110 Hb_003055_090 Hb_003055_090 Hb_001401_040--Hb_003055_090 Hb_001408_170 Hb_001408_170 Hb_001401_040--Hb_001408_170 Hb_003408_010 Hb_003408_010 Hb_001401_040--Hb_003408_010 Hb_017439_010 Hb_017439_010 Hb_001401_040--Hb_017439_010 Hb_001268_160 Hb_001268_160 Hb_001401_040--Hb_001268_160 Hb_048476_140 Hb_048476_140 Hb_000108_240--Hb_048476_140 Hb_000108_240--Hb_003408_010 Hb_004041_050 Hb_004041_050 Hb_000108_240--Hb_004041_050 Hb_005622_020 Hb_005622_020 Hb_000108_240--Hb_005622_020 Hb_001180_010 Hb_001180_010 Hb_000108_240--Hb_001180_010 Hb_000139_280 Hb_000139_280 Hb_000260_040--Hb_000139_280 Hb_005504_040 Hb_005504_040 Hb_000260_040--Hb_005504_040 Hb_000260_040--Hb_001401_040 Hb_003784_040 Hb_003784_040 Hb_000260_040--Hb_003784_040 Hb_000172_090 Hb_000172_090 Hb_000260_040--Hb_000172_090 Hb_002871_130 Hb_002871_130 Hb_004531_080--Hb_002871_130 Hb_007943_180 Hb_007943_180 Hb_004531_080--Hb_007943_180 Hb_000500_340 Hb_000500_340 Hb_004531_080--Hb_000500_340 Hb_004007_130 Hb_004007_130 Hb_004531_080--Hb_004007_130 Hb_001123_310 Hb_001123_310 Hb_004531_080--Hb_001123_310 Hb_000483_080 Hb_000483_080 Hb_004531_080--Hb_000483_080 Hb_003050_360 Hb_003050_360 Hb_001377_530--Hb_003050_360 Hb_002641_120 Hb_002641_120 Hb_001377_530--Hb_002641_120 Hb_003398_040 Hb_003398_040 Hb_001377_530--Hb_003398_040 Hb_001377_530--Hb_001123_310 Hb_003299_020 Hb_003299_020 Hb_001377_530--Hb_003299_020 Hb_001377_530--Hb_001408_170 Hb_000331_350 Hb_000331_350 Hb_010172_110--Hb_000331_350 Hb_007002_040 Hb_007002_040 Hb_010172_110--Hb_007002_040 Hb_000189_170 Hb_000189_170 Hb_010172_110--Hb_000189_170 Hb_002811_280 Hb_002811_280 Hb_010172_110--Hb_002811_280 Hb_000310_120 Hb_000310_120 Hb_010172_110--Hb_000310_120 Hb_001329_070 Hb_001329_070 Hb_010172_110--Hb_001329_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0359134 0.0236619 0.793029 0.558817 0 0.0201371
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.146661 0.0769386 0.097928 0.223935 0.245712

CAGE analysis