Hb_004204_090

Information

Type -
Description -
Location Contig4204: 53835-54278
Sequence    

Annotation

kegg
ID rcu:RCOM_1470430
description hypothetical protein
nr
ID KDP31321.1
description hypothetical protein JCGZ_11697 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K525
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11697 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004204_090 0.0 - - hypothetical protein JCGZ_11697 [Jatropha curcas]
2 Hb_042404_010 0.2238430879 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
3 Hb_003018_110 0.2283523652 - - -
4 Hb_007778_020 0.2300557113 - - -
5 Hb_188209_010 0.2320111535 - - PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Jatropha curcas]
6 Hb_114839_010 0.2487559077 - - -
7 Hb_133311_010 0.2523965202 - - PREDICTED: U-box domain-containing protein 62-like isoform X1 [Glycine max]
8 Hb_180333_010 0.2550823138 - - -
9 Hb_018247_010 0.2555552867 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
10 Hb_002471_170 0.2565426899 - - -
11 Hb_000699_020 0.257477201 - - PREDICTED: phosphoenolpyruvate carboxylase kinase 2-like [Jatropha curcas]
12 Hb_004070_030 0.2585412654 - - PREDICTED: phosphatidate cytidylyltransferase, mitochondrial isoform X2 [Jatropha curcas]
13 Hb_000788_130 0.259094195 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
14 Hb_076038_010 0.260232625 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000934_200 0.2609004821 - - PREDICTED: uncharacterized protein LOC105633952 [Jatropha curcas]
16 Hb_001195_100 0.2632602305 - - PREDICTED: uncharacterized protein LOC105633812 [Jatropha curcas]
17 Hb_000445_330 0.2643966219 - - conserved hypothetical protein [Ricinus communis]
18 Hb_073973_170 0.2663624967 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
19 Hb_005741_020 0.2678541779 - - PREDICTED: putative golgin subfamily A member 6-like protein 6 [Jatropha curcas]
20 Hb_006588_090 0.2693483194 - - PREDICTED: uncharacterized protein At4g28440 [Jatropha curcas]

Gene co-expression network

sample Hb_004204_090 Hb_004204_090 Hb_042404_010 Hb_042404_010 Hb_004204_090--Hb_042404_010 Hb_003018_110 Hb_003018_110 Hb_004204_090--Hb_003018_110 Hb_007778_020 Hb_007778_020 Hb_004204_090--Hb_007778_020 Hb_188209_010 Hb_188209_010 Hb_004204_090--Hb_188209_010 Hb_114839_010 Hb_114839_010 Hb_004204_090--Hb_114839_010 Hb_133311_010 Hb_133311_010 Hb_004204_090--Hb_133311_010 Hb_000445_330 Hb_000445_330 Hb_042404_010--Hb_000445_330 Hb_029982_010 Hb_029982_010 Hb_042404_010--Hb_029982_010 Hb_136765_010 Hb_136765_010 Hb_042404_010--Hb_136765_010 Hb_086859_010 Hb_086859_010 Hb_042404_010--Hb_086859_010 Hb_000331_500 Hb_000331_500 Hb_042404_010--Hb_000331_500 Hb_070820_010 Hb_070820_010 Hb_042404_010--Hb_070820_010 Hb_005545_030 Hb_005545_030 Hb_003018_110--Hb_005545_030 Hb_002681_040 Hb_002681_040 Hb_003018_110--Hb_002681_040 Hb_000680_150 Hb_000680_150 Hb_003018_110--Hb_000680_150 Hb_073973_170 Hb_073973_170 Hb_003018_110--Hb_073973_170 Hb_004046_040 Hb_004046_040 Hb_003018_110--Hb_004046_040 Hb_002918_280 Hb_002918_280 Hb_003018_110--Hb_002918_280 Hb_000175_090 Hb_000175_090 Hb_007778_020--Hb_000175_090 Hb_000504_170 Hb_000504_170 Hb_007778_020--Hb_000504_170 Hb_000258_320 Hb_000258_320 Hb_007778_020--Hb_000258_320 Hb_014720_170 Hb_014720_170 Hb_007778_020--Hb_014720_170 Hb_007083_010 Hb_007083_010 Hb_007778_020--Hb_007083_010 Hb_003297_010 Hb_003297_010 Hb_007778_020--Hb_003297_010 Hb_000788_130 Hb_000788_130 Hb_188209_010--Hb_000788_130 Hb_000789_070 Hb_000789_070 Hb_188209_010--Hb_000789_070 Hb_000326_070 Hb_000326_070 Hb_188209_010--Hb_000326_070 Hb_003371_180 Hb_003371_180 Hb_188209_010--Hb_003371_180 Hb_188209_010--Hb_000175_090 Hb_013405_060 Hb_013405_060 Hb_188209_010--Hb_013405_060 Hb_000189_360 Hb_000189_360 Hb_114839_010--Hb_000189_360 Hb_000086_330 Hb_000086_330 Hb_114839_010--Hb_000086_330 Hb_000931_030 Hb_000931_030 Hb_114839_010--Hb_000931_030 Hb_114839_010--Hb_042404_010 Hb_004098_030 Hb_004098_030 Hb_114839_010--Hb_004098_030 Hb_114839_010--Hb_070820_010 Hb_012135_010 Hb_012135_010 Hb_133311_010--Hb_012135_010 Hb_008667_040 Hb_008667_040 Hb_133311_010--Hb_008667_040 Hb_000179_150 Hb_000179_150 Hb_133311_010--Hb_000179_150 Hb_007333_010 Hb_007333_010 Hb_133311_010--Hb_007333_010 Hb_002045_140 Hb_002045_140 Hb_133311_010--Hb_002045_140 Hb_000264_290 Hb_000264_290 Hb_133311_010--Hb_000264_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.71481 0.910091 0.278824 0.107016 0.338044 0.790668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.47932 0.774639 0 0.0543918 0

CAGE analysis