Hb_007333_010

Information

Type -
Description -
Location Contig7333: 533-3616
Sequence    

Annotation

kegg
ID rcu:RCOM_1494390
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.25)
nr
ID XP_002516045.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9C821
description Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=2 SV=1
trembl
ID B9RQM6
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494390 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007333_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_082407_010 0.1718472911 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
3 Hb_000268_010 0.1961533979 - - conserved hypothetical protein [Ricinus communis]
4 Hb_007123_060 0.1996213571 - - PREDICTED: uncharacterized protein LOC105634060 [Jatropha curcas]
5 Hb_008442_010 0.2010876802 - - PREDICTED: nudix hydrolase 16, mitochondrial-like [Citrus sinensis]
6 Hb_000264_290 0.2058986604 - - PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha curcas]
7 Hb_133311_010 0.2080697511 - - PREDICTED: U-box domain-containing protein 62-like isoform X1 [Glycine max]
8 Hb_029888_020 0.2092616927 - - hypothetical protein PHAVU_007G268100g [Phaseolus vulgaris]
9 Hb_013492_010 0.2117171573 - - PREDICTED: uncharacterized protein LOC105640364 [Jatropha curcas]
10 Hb_096490_020 0.2129589188 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]
11 Hb_000010_210 0.2138492194 - - PREDICTED: centromere protein X [Jatropha curcas]
12 Hb_163599_010 0.2150700704 - - hypothetical protein RCOM_1579620 [Ricinus communis]
13 Hb_012135_010 0.2164076594 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
14 Hb_004807_060 0.2185931874 - - -
15 Hb_005511_100 0.2190884152 - - PREDICTED: uncharacterized protein LOC105645493 isoform X1 [Jatropha curcas]
16 Hb_086703_010 0.2205554641 - - PREDICTED: F-box protein At5g52880 [Jatropha curcas]
17 Hb_003746_060 0.2212288995 - - PREDICTED: DTW domain-containing protein 2 [Jatropha curcas]
18 Hb_035746_010 0.2233638809 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
19 Hb_098546_010 0.2255135078 - - thioredoxin-like family protein [Hevea brasiliensis]
20 Hb_002045_140 0.2265445663 - - histone acetyltransferase, partial [Triticum aestivum]

Gene co-expression network

sample Hb_007333_010 Hb_007333_010 Hb_082407_010 Hb_082407_010 Hb_007333_010--Hb_082407_010 Hb_000268_010 Hb_000268_010 Hb_007333_010--Hb_000268_010 Hb_007123_060 Hb_007123_060 Hb_007333_010--Hb_007123_060 Hb_008442_010 Hb_008442_010 Hb_007333_010--Hb_008442_010 Hb_000264_290 Hb_000264_290 Hb_007333_010--Hb_000264_290 Hb_133311_010 Hb_133311_010 Hb_007333_010--Hb_133311_010 Hb_082407_010--Hb_000268_010 Hb_000327_290 Hb_000327_290 Hb_082407_010--Hb_000327_290 Hb_013492_010 Hb_013492_010 Hb_082407_010--Hb_013492_010 Hb_003405_060 Hb_003405_060 Hb_082407_010--Hb_003405_060 Hb_182964_010 Hb_182964_010 Hb_082407_010--Hb_182964_010 Hb_082407_010--Hb_007123_060 Hb_014783_010 Hb_014783_010 Hb_000268_010--Hb_014783_010 Hb_003943_130 Hb_003943_130 Hb_000268_010--Hb_003943_130 Hb_004807_060 Hb_004807_060 Hb_000268_010--Hb_004807_060 Hb_002742_050 Hb_002742_050 Hb_000268_010--Hb_002742_050 Hb_002289_120 Hb_002289_120 Hb_000268_010--Hb_002289_120 Hb_004883_050 Hb_004883_050 Hb_007123_060--Hb_004883_050 Hb_012760_130 Hb_012760_130 Hb_007123_060--Hb_012760_130 Hb_001545_050 Hb_001545_050 Hb_007123_060--Hb_001545_050 Hb_007123_060--Hb_000327_290 Hb_184570_010 Hb_184570_010 Hb_007123_060--Hb_184570_010 Hb_012120_030 Hb_012120_030 Hb_007123_060--Hb_012120_030 Hb_008442_010--Hb_013492_010 Hb_000025_100 Hb_000025_100 Hb_008442_010--Hb_000025_100 Hb_001405_130 Hb_001405_130 Hb_008442_010--Hb_001405_130 Hb_029888_020 Hb_029888_020 Hb_008442_010--Hb_029888_020 Hb_121550_010 Hb_121550_010 Hb_008442_010--Hb_121550_010 Hb_147123_010 Hb_147123_010 Hb_008442_010--Hb_147123_010 Hb_000302_130 Hb_000302_130 Hb_000264_290--Hb_000302_130 Hb_000264_290--Hb_007123_060 Hb_000264_290--Hb_012120_030 Hb_008667_040 Hb_008667_040 Hb_000264_290--Hb_008667_040 Hb_188209_010 Hb_188209_010 Hb_000264_290--Hb_188209_010 Hb_149714_010 Hb_149714_010 Hb_000264_290--Hb_149714_010 Hb_012135_010 Hb_012135_010 Hb_133311_010--Hb_012135_010 Hb_133311_010--Hb_008667_040 Hb_000179_150 Hb_000179_150 Hb_133311_010--Hb_000179_150 Hb_002045_140 Hb_002045_140 Hb_133311_010--Hb_002045_140 Hb_133311_010--Hb_000264_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.776905 0.952366 0.527817 0.755749 0.154324 2.24924
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.33971 1.94856 0.0667529 0.26072 0.0742252

CAGE analysis