Hb_007123_060

Information

Type -
Description -
Location Contig7123: 129249-131432
Sequence    

Annotation

kegg
ID rcu:RCOM_0843370
description hypothetical protein
nr
ID XP_012072220.1
description PREDICTED: uncharacterized protein LOC105634060 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0N5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04698 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55363: 129300-135515
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007123_060 0.0 - - PREDICTED: uncharacterized protein LOC105634060 [Jatropha curcas]
2 Hb_004883_050 0.1147541759 - - PREDICTED: probable UDP-arabinopyranose mutase 5 isoform X2 [Vitis vinifera]
3 Hb_012760_130 0.1306169596 - - PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas]
4 Hb_001545_050 0.1408703992 - - PREDICTED: ras-related protein Rab7 [Nicotiana sylvestris]
5 Hb_000327_290 0.1416009924 - - Histone H4 [Triticum urartu]
6 Hb_184570_010 0.1429443187 - - PREDICTED: COP9 signalosome complex subunit 8 [Jatropha curcas]
7 Hb_012120_030 0.1459816291 - - -
8 Hb_003038_220 0.1469253856 - - eukaryotic translation initiation factor 2 gamma subunit, putative [Ricinus communis]
9 Hb_000264_290 0.1469778427 - - PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha curcas]
10 Hb_000416_070 0.1490400246 - - hypothetical protein JCGZ_21620 [Jatropha curcas]
11 Hb_000028_060 0.1495345756 - - -
12 Hb_002687_080 0.1522174352 - - hypothetical protein JCGZ_06535 [Jatropha curcas]
13 Hb_022181_030 0.1522847691 - - PREDICTED: uncharacterized protein LOC105649615 isoform X2 [Jatropha curcas]
14 Hb_082407_010 0.1540134042 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
15 Hb_001902_130 0.1556528357 - - 60S ribosomal protein L36-2 [Morus notabilis]
16 Hb_001380_020 0.1587230439 - - 3-isopropylmalate dehydratase, putative [Ricinus communis]
17 Hb_140291_010 0.1597379803 - - hypothetical protein JCGZ_17222 [Jatropha curcas]
18 Hb_003925_070 0.1613840002 - - ATOZI1, putative [Ricinus communis]
19 Hb_060715_010 0.1615594067 - - PREDICTED: notchless protein homolog [Gossypium raimondii]
20 Hb_096490_020 0.1623176193 - - PREDICTED: UPF0565 protein C2orf69 [Jatropha curcas]

Gene co-expression network

sample Hb_007123_060 Hb_007123_060 Hb_004883_050 Hb_004883_050 Hb_007123_060--Hb_004883_050 Hb_012760_130 Hb_012760_130 Hb_007123_060--Hb_012760_130 Hb_001545_050 Hb_001545_050 Hb_007123_060--Hb_001545_050 Hb_000327_290 Hb_000327_290 Hb_007123_060--Hb_000327_290 Hb_184570_010 Hb_184570_010 Hb_007123_060--Hb_184570_010 Hb_012120_030 Hb_012120_030 Hb_007123_060--Hb_012120_030 Hb_004883_050--Hb_012760_130 Hb_001829_040 Hb_001829_040 Hb_004883_050--Hb_001829_040 Hb_001911_040 Hb_001911_040 Hb_004883_050--Hb_001911_040 Hb_133724_010 Hb_133724_010 Hb_004883_050--Hb_133724_010 Hb_059480_010 Hb_059480_010 Hb_004883_050--Hb_059480_010 Hb_000416_070 Hb_000416_070 Hb_012760_130--Hb_000416_070 Hb_005731_120 Hb_005731_120 Hb_012760_130--Hb_005731_120 Hb_001287_080 Hb_001287_080 Hb_012760_130--Hb_001287_080 Hb_003498_090 Hb_003498_090 Hb_012760_130--Hb_003498_090 Hb_000028_060 Hb_000028_060 Hb_001545_050--Hb_000028_060 Hb_003925_070 Hb_003925_070 Hb_001545_050--Hb_003925_070 Hb_153258_050 Hb_153258_050 Hb_001545_050--Hb_153258_050 Hb_001902_130 Hb_001902_130 Hb_001545_050--Hb_001902_130 Hb_001545_050--Hb_004883_050 Hb_010504_030 Hb_010504_030 Hb_000327_290--Hb_010504_030 Hb_002687_080 Hb_002687_080 Hb_000327_290--Hb_002687_080 Hb_082407_010 Hb_082407_010 Hb_000327_290--Hb_082407_010 Hb_112047_010 Hb_112047_010 Hb_000327_290--Hb_112047_010 Hb_136731_010 Hb_136731_010 Hb_000327_290--Hb_136731_010 Hb_184570_010--Hb_000416_070 Hb_003011_040 Hb_003011_040 Hb_184570_010--Hb_003011_040 Hb_003363_120 Hb_003363_120 Hb_184570_010--Hb_003363_120 Hb_003878_010 Hb_003878_010 Hb_184570_010--Hb_003878_010 Hb_000155_180 Hb_000155_180 Hb_184570_010--Hb_000155_180 Hb_004223_220 Hb_004223_220 Hb_184570_010--Hb_004223_220 Hb_000186_190 Hb_000186_190 Hb_012120_030--Hb_000186_190 Hb_000264_290 Hb_000264_290 Hb_012120_030--Hb_000264_290 Hb_000106_130 Hb_000106_130 Hb_012120_030--Hb_000106_130 Hb_000302_130 Hb_000302_130 Hb_012120_030--Hb_000302_130 Hb_064264_010 Hb_064264_010 Hb_012120_030--Hb_064264_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.15001 5.05286 4.93723 8.26503 4.04558 11.3005
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.54935 8.19684 0.610776 1.78778 0.790447

CAGE analysis