Hb_003910_010

Information

Type -
Description -
Location Contig3910: 5529-9690
Sequence    

Annotation

kegg
ID rcu:RCOM_0602360
description multicopper oxidase, putative (EC:1.10.3.3)
nr
ID XP_012079166.1
description PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
swissprot
ID P29162
description L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067K6L0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12337 PE=4 SV=1
Gene Ontology
ID GO:0009505
description l-ascorbate oxidase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39174: 5568-9542 , PASA_asmbl_39175: 5568-13887
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003910_010 0.0 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
2 Hb_029695_050 0.1383493011 - - PREDICTED: fasciclin-like arabinogalactan protein 1 [Jatropha curcas]
3 Hb_131035_010 0.1437230577 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_135757_010 0.1465481576 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
5 Hb_011930_150 0.1515114244 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
6 Hb_000181_290 0.1522220083 - - hypothetical protein POPTR_0001s41000g [Populus trichocarpa]
7 Hb_024879_010 0.1552279965 - - unknown [Glycine max]
8 Hb_001008_200 0.1561160475 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC103961552 [Pyrus x bretschneideri]
9 Hb_000331_370 0.1569521011 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
10 Hb_084513_010 0.1576022742 - - PREDICTED: structural maintenance of chromosomes protein 5 [Jatropha curcas]
11 Hb_030736_060 0.1589771048 - - PREDICTED: lysM domain-containing GPI-anchored protein 1 [Jatropha curcas]
12 Hb_002192_030 0.1617350228 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004480_020 0.1628743135 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
14 Hb_000679_100 0.1633618607 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
15 Hb_007286_020 0.1672383104 - - hypothetical protein L484_010675 [Morus notabilis]
16 Hb_118507_010 0.1683376071 - - hypothetical protein VITISV_019292 [Vitis vinifera]
17 Hb_002660_150 0.1688008937 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]
18 Hb_001500_110 0.1706912996 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_000258_040 0.1732091828 - - PREDICTED: probable receptor-like protein kinase At3g55450 [Jatropha curcas]
20 Hb_000172_510 0.1732667919 - - hypothetical protein B456_007G243100 [Gossypium raimondii]

Gene co-expression network

sample Hb_003910_010 Hb_003910_010 Hb_029695_050 Hb_029695_050 Hb_003910_010--Hb_029695_050 Hb_131035_010 Hb_131035_010 Hb_003910_010--Hb_131035_010 Hb_135757_010 Hb_135757_010 Hb_003910_010--Hb_135757_010 Hb_011930_150 Hb_011930_150 Hb_003910_010--Hb_011930_150 Hb_000181_290 Hb_000181_290 Hb_003910_010--Hb_000181_290 Hb_024879_010 Hb_024879_010 Hb_003910_010--Hb_024879_010 Hb_000818_100 Hb_000818_100 Hb_029695_050--Hb_000818_100 Hb_029695_050--Hb_011930_150 Hb_029695_050--Hb_135757_010 Hb_030736_060 Hb_030736_060 Hb_029695_050--Hb_030736_060 Hb_000371_090 Hb_000371_090 Hb_029695_050--Hb_000371_090 Hb_007786_030 Hb_007786_030 Hb_029695_050--Hb_007786_030 Hb_000035_200 Hb_000035_200 Hb_131035_010--Hb_000035_200 Hb_002192_030 Hb_002192_030 Hb_131035_010--Hb_002192_030 Hb_007286_020 Hb_007286_020 Hb_131035_010--Hb_007286_020 Hb_001500_110 Hb_001500_110 Hb_131035_010--Hb_001500_110 Hb_027760_070 Hb_027760_070 Hb_131035_010--Hb_027760_070 Hb_146081_010 Hb_146081_010 Hb_131035_010--Hb_146081_010 Hb_000679_100 Hb_000679_100 Hb_135757_010--Hb_000679_100 Hb_001051_070 Hb_001051_070 Hb_135757_010--Hb_001051_070 Hb_135757_010--Hb_011930_150 Hb_001159_030 Hb_001159_030 Hb_135757_010--Hb_001159_030 Hb_135757_010--Hb_030736_060 Hb_011930_150--Hb_001051_070 Hb_009193_090 Hb_009193_090 Hb_011930_150--Hb_009193_090 Hb_000038_120 Hb_000038_120 Hb_011930_150--Hb_000038_120 Hb_011930_150--Hb_000371_090 Hb_004611_030 Hb_004611_030 Hb_000181_290--Hb_004611_030 Hb_073171_090 Hb_073171_090 Hb_000181_290--Hb_073171_090 Hb_083628_010 Hb_083628_010 Hb_000181_290--Hb_083628_010 Hb_009222_070 Hb_009222_070 Hb_000181_290--Hb_009222_070 Hb_000181_290--Hb_030736_060 Hb_000245_080 Hb_000245_080 Hb_024879_010--Hb_000245_080 Hb_074715_010 Hb_074715_010 Hb_024879_010--Hb_074715_010 Hb_001146_020 Hb_001146_020 Hb_024879_010--Hb_001146_020 Hb_000343_140 Hb_000343_140 Hb_024879_010--Hb_000343_140 Hb_004450_050 Hb_004450_050 Hb_024879_010--Hb_004450_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.7497 15.8859 17.367 52.4738 9.25465 12.2467
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.9662 4.53578 10.7042 20.3832 4.34175

CAGE analysis