Hb_003428_040

Information

Type -
Description -
Location Contig3428: 30729-37064
Sequence    

Annotation

kegg
ID rcu:RCOM_1063220
description Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative
nr
ID XP_012072520.1
description PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
swissprot
ID Q8H0T6
description Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1
trembl
ID A0A067LPI4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10279 PE=4 SV=1
Gene Ontology
ID GO:0016021
description phosphoenolpyruvate phosphate translocator chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003428_040 0.0 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
2 Hb_002205_160 0.1535040908 - - chalcone isomerase [Hibiscus cannabinus]
3 Hb_001001_010 0.1685898367 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
4 Hb_004650_040 0.1721992335 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105638892 [Jatropha curcas]
5 Hb_007441_290 0.1723218429 - - PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]
6 Hb_001277_120 0.1849107887 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
7 Hb_000540_210 0.1870759633 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002995_010 0.1905093722 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
9 Hb_010407_150 0.1938018222 transcription factor TF Family: MYB hypothetical protein POPTR_0008s16660g [Populus trichocarpa]
10 Hb_005695_070 0.1959309828 - - Cysteine-rich RLK 29 [Theobroma cacao]
11 Hb_007951_020 0.1963213569 - - cationic amino acid transporter 5 family protein [Populus trichocarpa]
12 Hb_012691_010 0.1979273192 - - hypothetical protein POPTR_0005s18750g [Populus trichocarpa]
13 Hb_150745_010 0.2011372685 - - hypothetical protein JCGZ_17337 [Jatropha curcas]
14 Hb_000035_150 0.2015698961 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 40 [Jatropha curcas]
15 Hb_007101_250 0.2032184483 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
16 Hb_169753_010 0.2035672407 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
17 Hb_000656_120 0.2043609362 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]
18 Hb_001581_040 0.2045435675 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_002200_020 0.2051523392 transcription factor TF Family: C2C2-Dof hypothetical protein RCOM_0137680 [Ricinus communis]
20 Hb_007076_010 0.2052090378 - - calcium-dependent protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_003428_040 Hb_003428_040 Hb_002205_160 Hb_002205_160 Hb_003428_040--Hb_002205_160 Hb_001001_010 Hb_001001_010 Hb_003428_040--Hb_001001_010 Hb_004650_040 Hb_004650_040 Hb_003428_040--Hb_004650_040 Hb_007441_290 Hb_007441_290 Hb_003428_040--Hb_007441_290 Hb_001277_120 Hb_001277_120 Hb_003428_040--Hb_001277_120 Hb_000540_210 Hb_000540_210 Hb_003428_040--Hb_000540_210 Hb_169753_010 Hb_169753_010 Hb_002205_160--Hb_169753_010 Hb_002205_160--Hb_007441_290 Hb_000035_150 Hb_000035_150 Hb_002205_160--Hb_000035_150 Hb_003992_130 Hb_003992_130 Hb_002205_160--Hb_003992_130 Hb_007951_020 Hb_007951_020 Hb_002205_160--Hb_007951_020 Hb_022406_010 Hb_022406_010 Hb_002205_160--Hb_022406_010 Hb_010407_150 Hb_010407_150 Hb_001001_010--Hb_010407_150 Hb_005695_070 Hb_005695_070 Hb_001001_010--Hb_005695_070 Hb_149985_030 Hb_149985_030 Hb_001001_010--Hb_149985_030 Hb_000349_170 Hb_000349_170 Hb_001001_010--Hb_000349_170 Hb_002995_010 Hb_002995_010 Hb_001001_010--Hb_002995_010 Hb_007076_010 Hb_007076_010 Hb_001001_010--Hb_007076_010 Hb_004650_040--Hb_007441_290 Hb_004650_040--Hb_002205_160 Hb_004650_040--Hb_169753_010 Hb_007632_200 Hb_007632_200 Hb_004650_040--Hb_007632_200 Hb_001143_200 Hb_001143_200 Hb_004650_040--Hb_001143_200 Hb_004650_040--Hb_022406_010 Hb_007441_290--Hb_169753_010 Hb_012753_150 Hb_012753_150 Hb_007441_290--Hb_012753_150 Hb_010267_020 Hb_010267_020 Hb_007441_290--Hb_010267_020 Hb_006519_020 Hb_006519_020 Hb_007441_290--Hb_006519_020 Hb_000189_350 Hb_000189_350 Hb_001277_120--Hb_000189_350 Hb_000142_030 Hb_000142_030 Hb_001277_120--Hb_000142_030 Hb_001277_120--Hb_007441_290 Hb_001277_120--Hb_004650_040 Hb_114292_010 Hb_114292_010 Hb_001277_120--Hb_114292_010 Hb_001761_010 Hb_001761_010 Hb_001277_120--Hb_001761_010 Hb_008115_030 Hb_008115_030 Hb_000540_210--Hb_008115_030 Hb_003787_050 Hb_003787_050 Hb_000540_210--Hb_003787_050 Hb_000365_110 Hb_000365_110 Hb_000540_210--Hb_000365_110 Hb_000574_270 Hb_000574_270 Hb_000540_210--Hb_000574_270 Hb_000483_050 Hb_000483_050 Hb_000540_210--Hb_000483_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.17278 1.06123 0.156121 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0660041 0 0 0.145185 0.054204

CAGE analysis