Hb_002823_020

Information

Type -
Description -
Location Contig2823: 25882-28098
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002823_020 0.0 - - -
2 Hb_000787_040 0.2488973253 - - PREDICTED: uncharacterized protein LOC105115900 isoform X1 [Populus euphratica]
3 Hb_176052_010 0.303806515 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_001221_460 0.336692916 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_001638_080 0.341075985 - - PREDICTED: uncharacterized protein LOC105642789 [Jatropha curcas]
6 Hb_028271_010 0.3490047051 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
7 Hb_000772_060 0.3558644371 - - conserved hypothetical protein [Ricinus communis]
8 Hb_107500_010 0.3582273276 - - -
9 Hb_025771_010 0.3673206397 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
10 Hb_026687_010 0.3700901999 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Eucalyptus grandis]
11 Hb_001268_100 0.3736283055 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein KNUCKLES [Jatropha curcas]
12 Hb_092891_010 0.3778181342 - - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
13 Hb_026687_030 0.3796999624 - - hypothetical protein AMTR_s00038p00220080 [Amborella trichopoda]
14 Hb_025048_020 0.3809937293 - - cytochrome P450, putative [Ricinus communis]
15 Hb_005048_060 0.3823334004 - - conserved hypothetical protein [Ricinus communis]
16 Hb_170207_010 0.3835878997 - - hypothetical protein JCGZ_01992 [Jatropha curcas]
17 Hb_003579_020 0.3838015545 - - PREDICTED: probable protein phosphatase 2C 9 [Populus euphratica]
18 Hb_007451_060 0.3844409364 - - BAHD family acyltransferase, clade V, putative [Theobroma cacao]
19 Hb_002641_110 0.3857324694 - - PREDICTED: uncharacterized protein LOC103448574 [Malus domestica]
20 Hb_062006_010 0.3880599511 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_002823_020 Hb_002823_020 Hb_000787_040 Hb_000787_040 Hb_002823_020--Hb_000787_040 Hb_176052_010 Hb_176052_010 Hb_002823_020--Hb_176052_010 Hb_001221_460 Hb_001221_460 Hb_002823_020--Hb_001221_460 Hb_001638_080 Hb_001638_080 Hb_002823_020--Hb_001638_080 Hb_028271_010 Hb_028271_010 Hb_002823_020--Hb_028271_010 Hb_000772_060 Hb_000772_060 Hb_002823_020--Hb_000772_060 Hb_005048_060 Hb_005048_060 Hb_000787_040--Hb_005048_060 Hb_000787_040--Hb_001638_080 Hb_000787_040--Hb_000772_060 Hb_000787_040--Hb_176052_010 Hb_026687_030 Hb_026687_030 Hb_000787_040--Hb_026687_030 Hb_025771_010 Hb_025771_010 Hb_176052_010--Hb_025771_010 Hb_003579_020 Hb_003579_020 Hb_176052_010--Hb_003579_020 Hb_000326_060 Hb_000326_060 Hb_176052_010--Hb_000326_060 Hb_005568_080 Hb_005568_080 Hb_176052_010--Hb_005568_080 Hb_000879_010 Hb_000879_010 Hb_176052_010--Hb_000879_010 Hb_000914_090 Hb_000914_090 Hb_176052_010--Hb_000914_090 Hb_001221_460--Hb_028271_010 Hb_017170_010 Hb_017170_010 Hb_001221_460--Hb_017170_010 Hb_033834_050 Hb_033834_050 Hb_001221_460--Hb_033834_050 Hb_003847_020 Hb_003847_020 Hb_001221_460--Hb_003847_020 Hb_012754_030 Hb_012754_030 Hb_001221_460--Hb_012754_030 Hb_026687_010 Hb_026687_010 Hb_001221_460--Hb_026687_010 Hb_002007_200 Hb_002007_200 Hb_001638_080--Hb_002007_200 Hb_002272_080 Hb_002272_080 Hb_001638_080--Hb_002272_080 Hb_001183_010 Hb_001183_010 Hb_001638_080--Hb_001183_010 Hb_028487_020 Hb_028487_020 Hb_001638_080--Hb_028487_020 Hb_088753_010 Hb_088753_010 Hb_001638_080--Hb_088753_010 Hb_037767_010 Hb_037767_010 Hb_001638_080--Hb_037767_010 Hb_028271_010--Hb_017170_010 Hb_002641_110 Hb_002641_110 Hb_028271_010--Hb_002641_110 Hb_001102_100 Hb_001102_100 Hb_028271_010--Hb_001102_100 Hb_028271_010--Hb_012754_030 Hb_004414_040 Hb_004414_040 Hb_028271_010--Hb_004414_040 Hb_001703_110 Hb_001703_110 Hb_000772_060--Hb_001703_110 Hb_000868_100 Hb_000868_100 Hb_000772_060--Hb_000868_100 Hb_011077_020 Hb_011077_020 Hb_000772_060--Hb_011077_020 Hb_031527_060 Hb_031527_060 Hb_000772_060--Hb_031527_060 Hb_002571_040 Hb_002571_040 Hb_000772_060--Hb_002571_040 Hb_101733_040 Hb_101733_040 Hb_000772_060--Hb_101733_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.105377 0.127426 0 0.0396483 0 0.0600469
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.303167 0 0.062052 0

CAGE analysis