Hb_025771_010

Information

Type -
Description -
Location Contig25771: 4007-6864
Sequence    

Annotation

kegg
ID rcu:RCOM_1045150
description TMV resistance protein N, putative
nr
ID KDP45571.1
description hypothetical protein JCGZ_17178 [Jatropha curcas]
swissprot
ID Q9SZ67
description Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1
trembl
ID A0A067LAS3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17178 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025771_010 0.0 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
2 Hb_176052_010 0.1894535824 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_000326_060 0.2174005084 - - PREDICTED: uncharacterized protein LOC104214925 [Nicotiana sylvestris]
4 Hb_055384_010 0.2301834486 - - -
5 Hb_087596_010 0.2422160195 - - PREDICTED: disease resistance protein RPS4-like [Jatropha curcas]
6 Hb_003446_050 0.2467442663 - - hypothetical protein B456_002G034000, partial [Gossypium raimondii]
7 Hb_145979_010 0.2486393549 - - PREDICTED: uncharacterized protein LOC105172316 [Sesamum indicum]
8 Hb_002217_180 0.2576657306 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108-like [Populus euphratica]
9 Hb_003579_020 0.2577586027 - - PREDICTED: probable protein phosphatase 2C 9 [Populus euphratica]
10 Hb_001277_220 0.260039651 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
11 Hb_006582_020 0.2604448611 - - Zinc finger protein ZFPM1 [Theobroma cacao]
12 Hb_085659_010 0.2624564097 - - PREDICTED: uncharacterized protein LOC104216799 [Nicotiana sylvestris]
13 Hb_003847_020 0.265913933 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
14 Hb_000103_060 0.2677504026 - - hypothetical protein JCGZ_02206 [Jatropha curcas]
15 Hb_010727_010 0.2688851434 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
16 Hb_169246_010 0.270664841 - - conserved hypothetical protein [Ricinus communis]
17 Hb_009486_190 0.2711739378 - - ATP binding protein, putative [Ricinus communis]
18 Hb_000381_080 0.2714019714 transcription factor TF Family: SNF2 PREDICTED: DNA repair protein RAD16 [Jatropha curcas]
19 Hb_005298_010 0.2728378199 - - -
20 Hb_007617_020 0.2740421271 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_025771_010 Hb_025771_010 Hb_176052_010 Hb_176052_010 Hb_025771_010--Hb_176052_010 Hb_000326_060 Hb_000326_060 Hb_025771_010--Hb_000326_060 Hb_055384_010 Hb_055384_010 Hb_025771_010--Hb_055384_010 Hb_087596_010 Hb_087596_010 Hb_025771_010--Hb_087596_010 Hb_003446_050 Hb_003446_050 Hb_025771_010--Hb_003446_050 Hb_145979_010 Hb_145979_010 Hb_025771_010--Hb_145979_010 Hb_003579_020 Hb_003579_020 Hb_176052_010--Hb_003579_020 Hb_176052_010--Hb_000326_060 Hb_005568_080 Hb_005568_080 Hb_176052_010--Hb_005568_080 Hb_000879_010 Hb_000879_010 Hb_176052_010--Hb_000879_010 Hb_000914_090 Hb_000914_090 Hb_176052_010--Hb_000914_090 Hb_000326_060--Hb_005568_080 Hb_033772_050 Hb_033772_050 Hb_000326_060--Hb_033772_050 Hb_009265_090 Hb_009265_090 Hb_000326_060--Hb_009265_090 Hb_009486_190 Hb_009486_190 Hb_000326_060--Hb_009486_190 Hb_000264_090 Hb_000264_090 Hb_000326_060--Hb_000264_090 Hb_000363_140 Hb_000363_140 Hb_000326_060--Hb_000363_140 Hb_112399_010 Hb_112399_010 Hb_055384_010--Hb_112399_010 Hb_002435_110 Hb_002435_110 Hb_055384_010--Hb_002435_110 Hb_008103_120 Hb_008103_120 Hb_055384_010--Hb_008103_120 Hb_120155_010 Hb_120155_010 Hb_055384_010--Hb_120155_010 Hb_002025_310 Hb_002025_310 Hb_055384_010--Hb_002025_310 Hb_003073_210 Hb_003073_210 Hb_055384_010--Hb_003073_210 Hb_000575_150 Hb_000575_150 Hb_087596_010--Hb_000575_150 Hb_000777_030 Hb_000777_030 Hb_087596_010--Hb_000777_030 Hb_004230_040 Hb_004230_040 Hb_087596_010--Hb_004230_040 Hb_000016_100 Hb_000016_100 Hb_087596_010--Hb_000016_100 Hb_001969_090 Hb_001969_090 Hb_087596_010--Hb_001969_090 Hb_087596_010--Hb_000914_090 Hb_003446_050--Hb_000326_060 Hb_132998_020 Hb_132998_020 Hb_003446_050--Hb_132998_020 Hb_007617_020 Hb_007617_020 Hb_003446_050--Hb_007617_020 Hb_079268_010 Hb_079268_010 Hb_003446_050--Hb_079268_010 Hb_012033_020 Hb_012033_020 Hb_003446_050--Hb_012033_020 Hb_064264_010 Hb_064264_010 Hb_003446_050--Hb_064264_010 Hb_000087_050 Hb_000087_050 Hb_145979_010--Hb_000087_050 Hb_145979_010--Hb_000016_100 Hb_010727_010 Hb_010727_010 Hb_145979_010--Hb_010727_010 Hb_000923_050 Hb_000923_050 Hb_145979_010--Hb_000923_050 Hb_001477_130 Hb_001477_130 Hb_145979_010--Hb_001477_130 Hb_001016_110 Hb_001016_110 Hb_145979_010--Hb_001016_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.375399 0.662331 0.0754709 0 0.0898691 0.653724
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.226324 1.2446 0.278544 0.309116 0

CAGE analysis