Hb_000363_140

Information

Type -
Description -
Location Contig363: 105496-107559
Sequence    

Annotation

kegg
ID cic:CICLE_v10009052mg
description hypothetical protein
nr
ID XP_006452512.1
description hypothetical protein CICLE_v10009052mg [Citrus clementina]
swissprot
ID Q6ICW6
description Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana GN=WNK11 PE=2 SV=1
trembl
ID V4UI19
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009052mg PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable serine threonine-protein kinase wnk11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37281: 105573-107534
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_140 0.0 - - hypothetical protein CICLE_v10009052mg [Citrus clementina]
2 Hb_033772_050 0.1299816602 transcription factor TF Family: MYB PREDICTED: myb-related protein A-like [Jatropha curcas]
3 Hb_001364_030 0.1326975758 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
4 Hb_002798_050 0.1349687934 - - l-allo-threonine aldolase, putative [Ricinus communis]
5 Hb_000914_090 0.1452480425 - - PREDICTED: uncharacterized protein LOC105648257 [Jatropha curcas]
6 Hb_002909_070 0.1525443584 - - hypothetical protein POPTR_0006s03000g [Populus trichocarpa]
7 Hb_174865_030 0.1544204609 - - PREDICTED: hemiasterlin resistant protein 1 [Eucalyptus grandis]
8 Hb_029904_030 0.1544324719 - - aspartate aminotransferase, putative [Ricinus communis]
9 Hb_029866_060 0.157626609 - - hypothetical protein PRUPE_ppa012628mg [Prunus persica]
10 Hb_001956_070 0.1589845071 - - PREDICTED: telomere repeat-binding protein 2 isoform X2 [Jatropha curcas]
11 Hb_002909_060 0.1622214011 - - 3-5 exonuclease, putative [Ricinus communis]
12 Hb_016604_020 0.1636865151 - - -
13 Hb_015807_100 0.1659758303 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
14 Hb_000349_290 0.1660238874 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Jatropha curcas]
15 Hb_002053_060 0.1671836649 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Jatropha curcas]
16 Hb_003893_090 0.167725568 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
17 Hb_002182_060 0.167799658 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATXR6 [Jatropha curcas]
18 Hb_000326_060 0.168480634 - - PREDICTED: uncharacterized protein LOC104214925 [Nicotiana sylvestris]
19 Hb_000975_360 0.1687526795 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002316_060 0.1707057326 - - PREDICTED: uncharacterized protein LOC105640410 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_140 Hb_000363_140 Hb_033772_050 Hb_033772_050 Hb_000363_140--Hb_033772_050 Hb_001364_030 Hb_001364_030 Hb_000363_140--Hb_001364_030 Hb_002798_050 Hb_002798_050 Hb_000363_140--Hb_002798_050 Hb_000914_090 Hb_000914_090 Hb_000363_140--Hb_000914_090 Hb_002909_070 Hb_002909_070 Hb_000363_140--Hb_002909_070 Hb_174865_030 Hb_174865_030 Hb_000363_140--Hb_174865_030 Hb_009486_190 Hb_009486_190 Hb_033772_050--Hb_009486_190 Hb_003992_080 Hb_003992_080 Hb_033772_050--Hb_003992_080 Hb_005568_080 Hb_005568_080 Hb_033772_050--Hb_005568_080 Hb_000326_060 Hb_000326_060 Hb_033772_050--Hb_000326_060 Hb_004129_150 Hb_004129_150 Hb_033772_050--Hb_004129_150 Hb_005701_030 Hb_005701_030 Hb_001364_030--Hb_005701_030 Hb_001364_030--Hb_033772_050 Hb_000260_310 Hb_000260_310 Hb_001364_030--Hb_000260_310 Hb_016604_020 Hb_016604_020 Hb_001364_030--Hb_016604_020 Hb_001364_030--Hb_009486_190 Hb_000111_330 Hb_000111_330 Hb_002798_050--Hb_000111_330 Hb_029904_030 Hb_029904_030 Hb_002798_050--Hb_029904_030 Hb_029866_060 Hb_029866_060 Hb_002798_050--Hb_029866_060 Hb_015807_100 Hb_015807_100 Hb_002798_050--Hb_015807_100 Hb_011173_050 Hb_011173_050 Hb_002798_050--Hb_011173_050 Hb_001633_030 Hb_001633_030 Hb_002798_050--Hb_001633_030 Hb_001205_070 Hb_001205_070 Hb_000914_090--Hb_001205_070 Hb_000879_010 Hb_000879_010 Hb_000914_090--Hb_000879_010 Hb_000196_050 Hb_000196_050 Hb_000914_090--Hb_000196_050 Hb_002811_230 Hb_002811_230 Hb_000914_090--Hb_002811_230 Hb_000914_090--Hb_002909_070 Hb_006582_020 Hb_006582_020 Hb_000914_090--Hb_006582_020 Hb_000030_150 Hb_000030_150 Hb_002909_070--Hb_000030_150 Hb_003893_090 Hb_003893_090 Hb_002909_070--Hb_003893_090 Hb_000905_200 Hb_000905_200 Hb_002909_070--Hb_000905_200 Hb_003106_050 Hb_003106_050 Hb_002909_070--Hb_003106_050 Hb_002182_060 Hb_002182_060 Hb_002909_070--Hb_002182_060 Hb_002301_140 Hb_002301_140 Hb_002909_070--Hb_002301_140 Hb_000987_120 Hb_000987_120 Hb_174865_030--Hb_000987_120 Hb_001722_100 Hb_001722_100 Hb_174865_030--Hb_001722_100 Hb_002540_030 Hb_002540_030 Hb_174865_030--Hb_002540_030 Hb_000446_030 Hb_000446_030 Hb_174865_030--Hb_000446_030 Hb_001235_190 Hb_001235_190 Hb_174865_030--Hb_001235_190 Hb_000522_080 Hb_000522_080 Hb_174865_030--Hb_000522_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
65.2694 103.261 24.9391 31.2377 21.2401 46.516
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
157.977 220.996 105.657 18.638 7.66905

CAGE analysis