Hb_055384_010

Information

Type -
Description -
Location Contig55384: 257-692
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_055384_010 0.0 - - -
2 Hb_112399_010 0.14972257 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_002435_110 0.1885755519 transcription factor TF Family: SNF2 PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Jatropha curcas]
4 Hb_008103_120 0.1895437176 - - hypothetical protein CISIN_1g009650mg [Citrus sinensis]
5 Hb_120155_010 0.1911613463 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
6 Hb_002025_310 0.1997155956 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
7 Hb_003073_210 0.2002327757 - - hypothetical protein CISIN_1g036722mg, partial [Citrus sinensis]
8 Hb_000640_300 0.2017961486 transcription factor TF Family: WRKY WRKY1 [Hevea brasiliensis]
9 Hb_001277_220 0.2042112714 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
10 Hb_005625_040 0.2106881306 - - snf1-kinase beta subunit, plants, putative [Ricinus communis]
11 Hb_003312_010 0.210864878 - - PREDICTED: uncharacterized protein LOC104428797 [Eucalyptus grandis]
12 Hb_000045_150 0.2120077356 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
13 Hb_000421_070 0.2120955989 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_005839_120 0.2162971622 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Jatropha curcas]
15 Hb_000575_150 0.2163734274 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
16 Hb_002400_400 0.2183769395 - - PREDICTED: topless-related protein 1-like isoform X3 [Jatropha curcas]
17 Hb_004129_130 0.2185177881 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_026698_010 0.2200829929 - - 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
19 Hb_001318_030 0.2201732749 - - PREDICTED: uncharacterized protein LOC105642686 [Jatropha curcas]
20 Hb_005306_130 0.2203623016 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]

Gene co-expression network

sample Hb_055384_010 Hb_055384_010 Hb_112399_010 Hb_112399_010 Hb_055384_010--Hb_112399_010 Hb_002435_110 Hb_002435_110 Hb_055384_010--Hb_002435_110 Hb_008103_120 Hb_008103_120 Hb_055384_010--Hb_008103_120 Hb_120155_010 Hb_120155_010 Hb_055384_010--Hb_120155_010 Hb_002025_310 Hb_002025_310 Hb_055384_010--Hb_002025_310 Hb_003073_210 Hb_003073_210 Hb_055384_010--Hb_003073_210 Hb_005298_010 Hb_005298_010 Hb_112399_010--Hb_005298_010 Hb_000056_100 Hb_000056_100 Hb_112399_010--Hb_000056_100 Hb_001184_110 Hb_001184_110 Hb_112399_010--Hb_001184_110 Hb_000853_110 Hb_000853_110 Hb_112399_010--Hb_000853_110 Hb_005625_060 Hb_005625_060 Hb_112399_010--Hb_005625_060 Hb_006582_020 Hb_006582_020 Hb_002435_110--Hb_006582_020 Hb_000567_210 Hb_000567_210 Hb_002435_110--Hb_000567_210 Hb_000859_060 Hb_000859_060 Hb_002435_110--Hb_000859_060 Hb_002685_170 Hb_002685_170 Hb_002435_110--Hb_002685_170 Hb_009838_050 Hb_009838_050 Hb_002435_110--Hb_009838_050 Hb_009767_100 Hb_009767_100 Hb_002435_110--Hb_009767_100 Hb_003750_080 Hb_003750_080 Hb_008103_120--Hb_003750_080 Hb_000291_110 Hb_000291_110 Hb_008103_120--Hb_000291_110 Hb_093084_060 Hb_093084_060 Hb_008103_120--Hb_093084_060 Hb_005306_130 Hb_005306_130 Hb_008103_120--Hb_005306_130 Hb_181235_010 Hb_181235_010 Hb_008103_120--Hb_181235_010 Hb_000116_480 Hb_000116_480 Hb_008103_120--Hb_000116_480 Hb_000125_120 Hb_000125_120 Hb_120155_010--Hb_000125_120 Hb_001277_220 Hb_001277_220 Hb_120155_010--Hb_001277_220 Hb_000059_040 Hb_000059_040 Hb_120155_010--Hb_000059_040 Hb_000200_140 Hb_000200_140 Hb_120155_010--Hb_000200_140 Hb_000548_050 Hb_000548_050 Hb_120155_010--Hb_000548_050 Hb_001946_270 Hb_001946_270 Hb_002025_310--Hb_001946_270 Hb_001102_180 Hb_001102_180 Hb_002025_310--Hb_001102_180 Hb_002205_120 Hb_002205_120 Hb_002025_310--Hb_002205_120 Hb_028872_060 Hb_028872_060 Hb_002025_310--Hb_028872_060 Hb_003312_010 Hb_003312_010 Hb_002025_310--Hb_003312_010 Hb_000270_020 Hb_000270_020 Hb_003073_210--Hb_000270_020 Hb_001771_130 Hb_001771_130 Hb_003073_210--Hb_001771_130 Hb_000041_220 Hb_000041_220 Hb_003073_210--Hb_000041_220 Hb_003299_090 Hb_003299_090 Hb_003073_210--Hb_003299_090 Hb_001584_170 Hb_001584_170 Hb_003073_210--Hb_001584_170 Hb_005839_120 Hb_005839_120 Hb_003073_210--Hb_005839_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.364388 0.48837 0.205617 0 0.238663 0.578982
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.289808 0.455728 0.341134 0.41105 0

CAGE analysis