Hb_012754_030

Information

Type -
Description -
Location Contig12754: 37714-38142
Sequence    

Annotation

kegg
ID rcu:RCOM_1017980
description hypothetical protein
nr
ID XP_012071100.1
description PREDICTED: uncharacterized protein LOC105633150 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KT01
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01098 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012754_030 0.0 - - PREDICTED: uncharacterized protein LOC105633150 isoform X1 [Jatropha curcas]
2 Hb_000563_310 0.2253666309 transcription factor TF Family: ERF ethylene-responsive transcription factor 3 [Hevea brasiliensis]
3 Hb_003398_140 0.2511051038 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
4 Hb_000340_440 0.255271954 - - PREDICTED: gibberellin receptor GID1B [Jatropha curcas]
5 Hb_028271_010 0.2637988287 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
6 Hb_009680_040 0.2647106919 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
7 Hb_026687_010 0.2664426309 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Eucalyptus grandis]
8 Hb_003847_020 0.2700735893 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
9 Hb_001221_460 0.2711562606 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_002382_030 0.2772378847 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like isoform X2 [Malus domestica]
11 Hb_002908_070 0.2787455782 - - DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative [Ricinus communis]
12 Hb_148850_010 0.2819761371 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
13 Hb_005772_010 0.2850413928 - - PREDICTED: abscisic acid receptor PYL4 [Jatropha curcas]
14 Hb_002784_140 0.2872384003 - - glutamate receptor 2 plant, putative [Ricinus communis]
15 Hb_086692_020 0.2890263371 - - PREDICTED: protein kinase APK1B, chloroplastic-like [Jatropha curcas]
16 Hb_000094_110 0.296343026 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004414_040 0.3022351716 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
18 Hb_001214_080 0.3057665263 - - PREDICTED: transcription factor HBP-1b(c38)-like [Jatropha curcas]
19 Hb_000352_180 0.3165887297 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003992_080 0.3172257566 - - PREDICTED: protein LURP-one-related 5 [Jatropha curcas]

Gene co-expression network

sample Hb_012754_030 Hb_012754_030 Hb_000563_310 Hb_000563_310 Hb_012754_030--Hb_000563_310 Hb_003398_140 Hb_003398_140 Hb_012754_030--Hb_003398_140 Hb_000340_440 Hb_000340_440 Hb_012754_030--Hb_000340_440 Hb_028271_010 Hb_028271_010 Hb_012754_030--Hb_028271_010 Hb_009680_040 Hb_009680_040 Hb_012754_030--Hb_009680_040 Hb_026687_010 Hb_026687_010 Hb_012754_030--Hb_026687_010 Hb_002784_140 Hb_002784_140 Hb_000563_310--Hb_002784_140 Hb_000563_310--Hb_000340_440 Hb_005772_010 Hb_005772_010 Hb_000563_310--Hb_005772_010 Hb_003579_020 Hb_003579_020 Hb_000563_310--Hb_003579_020 Hb_000258_280 Hb_000258_280 Hb_000563_310--Hb_000258_280 Hb_009880_010 Hb_009880_010 Hb_000563_310--Hb_009880_010 Hb_086692_020 Hb_086692_020 Hb_003398_140--Hb_086692_020 Hb_000094_110 Hb_000094_110 Hb_003398_140--Hb_000094_110 Hb_003847_020 Hb_003847_020 Hb_003398_140--Hb_003847_020 Hb_002067_140 Hb_002067_140 Hb_003398_140--Hb_002067_140 Hb_028271_020 Hb_028271_020 Hb_003398_140--Hb_028271_020 Hb_003398_140--Hb_026687_010 Hb_000340_440--Hb_002784_140 Hb_000316_100 Hb_000316_100 Hb_000340_440--Hb_000316_100 Hb_000340_440--Hb_000094_110 Hb_000175_130 Hb_000175_130 Hb_000340_440--Hb_000175_130 Hb_006132_050 Hb_006132_050 Hb_000340_440--Hb_006132_050 Hb_148850_010 Hb_148850_010 Hb_000340_440--Hb_148850_010 Hb_001221_460 Hb_001221_460 Hb_028271_010--Hb_001221_460 Hb_017170_010 Hb_017170_010 Hb_028271_010--Hb_017170_010 Hb_002641_110 Hb_002641_110 Hb_028271_010--Hb_002641_110 Hb_001102_100 Hb_001102_100 Hb_028271_010--Hb_001102_100 Hb_004414_040 Hb_004414_040 Hb_028271_010--Hb_004414_040 Hb_009680_040--Hb_003398_140 Hb_001638_070 Hb_001638_070 Hb_009680_040--Hb_001638_070 Hb_009680_040--Hb_028271_020 Hb_003540_200 Hb_003540_200 Hb_009680_040--Hb_003540_200 Hb_001488_370 Hb_001488_370 Hb_009680_040--Hb_001488_370 Hb_000997_190 Hb_000997_190 Hb_009680_040--Hb_000997_190 Hb_026687_010--Hb_003847_020 Hb_026687_010--Hb_028271_020 Hb_000099_070 Hb_000099_070 Hb_026687_010--Hb_000099_070 Hb_003992_080 Hb_003992_080 Hb_026687_010--Hb_003992_080 Hb_026687_010--Hb_000094_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.362584 0.213129 0.154476 0 0.186233 0.17453
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 2.36134 0.466373 0.314367 0

CAGE analysis