Hb_017170_010

Information

Type -
Description -
Location Contig17170: 1770-3134
Sequence    

Annotation

kegg
ID rcu:RCOM_1171020
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_011002662.1
description PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID B9RVQ8
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1171020 PE=4 SV=1
Gene Ontology
ID GO:0016206
description trans-resveratrol di-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017170_010 0.0 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
2 Hb_041405_010 0.1680199549 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Glycine max]
3 Hb_028271_010 0.1833102773 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
4 Hb_001221_460 0.2076686035 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_096292_010 0.2091023251 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
6 Hb_187134_010 0.2275277081 - - -
7 Hb_007273_010 0.2281171382 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
8 Hb_185736_010 0.2294254418 - - -
9 Hb_011016_040 0.2409767047 - - calcium-dependent protein kinase, putative [Ricinus communis]
10 Hb_000143_040 0.2409846598 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
11 Hb_000258_190 0.2411689678 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
12 Hb_003388_090 0.2413271586 - - putative beta-D-xylosidase 5 -like protein [Gossypium arboreum]
13 Hb_000265_180 0.2416134501 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
14 Hb_004881_110 0.2422180526 - - -
15 Hb_001369_330 0.2422426741 - - conserved hypothetical protein [Ricinus communis]
16 Hb_010120_010 0.2424661195 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
17 Hb_010267_010 0.2427684486 - - -
18 Hb_000111_020 0.2444128409 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
19 Hb_034661_020 0.2457810538 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
20 Hb_035492_010 0.25067241 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]

Gene co-expression network

sample Hb_017170_010 Hb_017170_010 Hb_041405_010 Hb_041405_010 Hb_017170_010--Hb_041405_010 Hb_028271_010 Hb_028271_010 Hb_017170_010--Hb_028271_010 Hb_001221_460 Hb_001221_460 Hb_017170_010--Hb_001221_460 Hb_096292_010 Hb_096292_010 Hb_017170_010--Hb_096292_010 Hb_187134_010 Hb_187134_010 Hb_017170_010--Hb_187134_010 Hb_007273_010 Hb_007273_010 Hb_017170_010--Hb_007273_010 Hb_041405_010--Hb_096292_010 Hb_041405_010--Hb_007273_010 Hb_041405_010--Hb_187134_010 Hb_185736_010 Hb_185736_010 Hb_041405_010--Hb_185736_010 Hb_000111_020 Hb_000111_020 Hb_041405_010--Hb_000111_020 Hb_028271_010--Hb_001221_460 Hb_002641_110 Hb_002641_110 Hb_028271_010--Hb_002641_110 Hb_001102_100 Hb_001102_100 Hb_028271_010--Hb_001102_100 Hb_012754_030 Hb_012754_030 Hb_028271_010--Hb_012754_030 Hb_004414_040 Hb_004414_040 Hb_028271_010--Hb_004414_040 Hb_033834_050 Hb_033834_050 Hb_001221_460--Hb_033834_050 Hb_003847_020 Hb_003847_020 Hb_001221_460--Hb_003847_020 Hb_001221_460--Hb_012754_030 Hb_026687_010 Hb_026687_010 Hb_001221_460--Hb_026687_010 Hb_096292_010--Hb_000111_020 Hb_096292_010--Hb_185736_010 Hb_096292_010--Hb_007273_010 Hb_096292_010--Hb_187134_010 Hb_001627_030 Hb_001627_030 Hb_096292_010--Hb_001627_030 Hb_000002_200 Hb_000002_200 Hb_096292_010--Hb_000002_200 Hb_187134_010--Hb_007273_010 Hb_187134_010--Hb_185736_010 Hb_187134_010--Hb_000111_020 Hb_011016_040 Hb_011016_040 Hb_187134_010--Hb_011016_040 Hb_000143_040 Hb_000143_040 Hb_187134_010--Hb_000143_040 Hb_000258_190 Hb_000258_190 Hb_187134_010--Hb_000258_190 Hb_007273_010--Hb_185736_010 Hb_007273_010--Hb_000111_020 Hb_007273_010--Hb_001627_030 Hb_007273_010--Hb_011016_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.71891 0.162848 0.0157603 0.204947 0.433839 1.3964
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.182478 39.8293 1.39433 10.0669 0

CAGE analysis