Hb_041405_010

Information

Type -
Description -
Location Contig41405: 325-534
Sequence    

Annotation

kegg
ID gmx:100781008
description trans-resveratrol di-O-methyltransferase-like
nr
ID XP_003557042.1
description PREDICTED: trans-resveratrol di-O-methyltransferase-like [Glycine max]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID I1JJX3
description Uncharacterized protein OS=Glycine max PE=4 SV=1
Gene Ontology
ID GO:0046983
description 8-hydroxyquercetin 8-o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041405_010 0.0 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Glycine max]
2 Hb_096292_010 0.1164677184 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
3 Hb_007273_010 0.1544969404 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
4 Hb_187134_010 0.1545026429 - - -
5 Hb_185736_010 0.1552038548 - - -
6 Hb_017170_010 0.1680199549 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
7 Hb_000111_020 0.1713280545 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
8 Hb_147793_010 0.1764904973 - - PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Jatropha curcas]
9 Hb_001627_030 0.182498812 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
10 Hb_011016_040 0.1834425198 - - calcium-dependent protein kinase, putative [Ricinus communis]
11 Hb_000143_040 0.1834555509 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
12 Hb_000258_190 0.1837571362 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
13 Hb_003388_090 0.1840154891 - - putative beta-D-xylosidase 5 -like protein [Gossypium arboreum]
14 Hb_000265_180 0.1844819058 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
15 Hb_004881_110 0.1854621855 - - -
16 Hb_001369_330 0.1855019734 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010120_010 0.1858625931 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
18 Hb_010267_010 0.1863492115 - - -
19 Hb_000002_200 0.1903918487 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096 [Brassica rapa]
20 Hb_034661_020 0.1921131217 - - hypothetical protein JCGZ_04352 [Jatropha curcas]

Gene co-expression network

sample Hb_041405_010 Hb_041405_010 Hb_096292_010 Hb_096292_010 Hb_041405_010--Hb_096292_010 Hb_007273_010 Hb_007273_010 Hb_041405_010--Hb_007273_010 Hb_187134_010 Hb_187134_010 Hb_041405_010--Hb_187134_010 Hb_185736_010 Hb_185736_010 Hb_041405_010--Hb_185736_010 Hb_017170_010 Hb_017170_010 Hb_041405_010--Hb_017170_010 Hb_000111_020 Hb_000111_020 Hb_041405_010--Hb_000111_020 Hb_096292_010--Hb_000111_020 Hb_096292_010--Hb_185736_010 Hb_096292_010--Hb_007273_010 Hb_096292_010--Hb_187134_010 Hb_001627_030 Hb_001627_030 Hb_096292_010--Hb_001627_030 Hb_000002_200 Hb_000002_200 Hb_096292_010--Hb_000002_200 Hb_007273_010--Hb_187134_010 Hb_007273_010--Hb_185736_010 Hb_007273_010--Hb_000111_020 Hb_007273_010--Hb_001627_030 Hb_011016_040 Hb_011016_040 Hb_007273_010--Hb_011016_040 Hb_187134_010--Hb_185736_010 Hb_187134_010--Hb_000111_020 Hb_187134_010--Hb_011016_040 Hb_000143_040 Hb_000143_040 Hb_187134_010--Hb_000143_040 Hb_000258_190 Hb_000258_190 Hb_187134_010--Hb_000258_190 Hb_185736_010--Hb_000111_020 Hb_185736_010--Hb_001627_030 Hb_185736_010--Hb_011016_040 Hb_028271_010 Hb_028271_010 Hb_017170_010--Hb_028271_010 Hb_001221_460 Hb_001221_460 Hb_017170_010--Hb_001221_460 Hb_017170_010--Hb_096292_010 Hb_017170_010--Hb_187134_010 Hb_017170_010--Hb_007273_010 Hb_000111_020--Hb_001627_030 Hb_000111_020--Hb_000002_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.13359 0 0 0 1.28602 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 146.506 5.3214 33.3374 1.10792

CAGE analysis