Hb_002783_030

Information

Type -
Description -
Location Contig2783: 19133-23127
Sequence    

Annotation

kegg
ID rcu:RCOM_1598420
description Receptor protein kinase CLAVATA1 precursor, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012073772.1
description PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
swissprot
ID Q9SYQ8
description Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3
trembl
ID A0A067KPG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08194 PE=4 SV=1
Gene Ontology
ID GO:0005622
description receptor protein kinase clavata1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29032: 21179-23015
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002783_030 0.0 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
2 Hb_000347_320 0.1429155857 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
3 Hb_022693_020 0.146385592 - - pectin acetylesterase, putative [Ricinus communis]
4 Hb_114917_010 0.1530072834 - - PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Jatropha curcas]
5 Hb_001221_400 0.1579282129 - - PREDICTED: CBS domain-containing protein CBSCBSPB1 [Jatropha curcas]
6 Hb_020141_030 0.1614184095 - - solanesyl diphosphate synthase, putative [Ricinus communis]
7 Hb_003097_220 0.1615423729 - - hypothetical protein POPTR_0001s06150g [Populus trichocarpa]
8 Hb_000538_300 0.1689669453 - - PREDICTED: WAT1-related protein At3g02690, chloroplastic [Jatropha curcas]
9 Hb_003929_240 0.1697875633 - - PREDICTED: uncharacterized protein LOC105643616 isoform X2 [Jatropha curcas]
10 Hb_002613_040 0.1698276206 - - phosphate translocator-related family protein [Populus trichocarpa]
11 Hb_003018_150 0.1699966719 - - PREDICTED: uncharacterized protein LOC105628869 [Jatropha curcas]
12 Hb_000056_110 0.1726893723 - - PREDICTED: uncharacterized protein LOC105630405 [Jatropha curcas]
13 Hb_003494_150 0.1766806147 - - Silicon transporter, putative [Ricinus communis]
14 Hb_005914_160 0.1774466082 - - PREDICTED: protein PROTON GRADIENT REGULATION 5, chloroplastic [Jatropha curcas]
15 Hb_000661_270 0.1777830731 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
16 Hb_009004_010 0.1794946035 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
17 Hb_007666_010 0.1801634089 - - PREDICTED: uncharacterized protein LOC105649266 [Jatropha curcas]
18 Hb_000208_270 0.1809516465 - - PREDICTED: malate dehydrogenase [NADP], chloroplastic [Jatropha curcas]
19 Hb_002010_110 0.1810156063 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
20 Hb_005867_050 0.1833743099 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]

Gene co-expression network

sample Hb_002783_030 Hb_002783_030 Hb_000347_320 Hb_000347_320 Hb_002783_030--Hb_000347_320 Hb_022693_020 Hb_022693_020 Hb_002783_030--Hb_022693_020 Hb_114917_010 Hb_114917_010 Hb_002783_030--Hb_114917_010 Hb_001221_400 Hb_001221_400 Hb_002783_030--Hb_001221_400 Hb_020141_030 Hb_020141_030 Hb_002783_030--Hb_020141_030 Hb_003097_220 Hb_003097_220 Hb_002783_030--Hb_003097_220 Hb_000271_130 Hb_000271_130 Hb_000347_320--Hb_000271_130 Hb_007666_010 Hb_007666_010 Hb_000347_320--Hb_007666_010 Hb_000120_480 Hb_000120_480 Hb_000347_320--Hb_000120_480 Hb_000230_490 Hb_000230_490 Hb_000347_320--Hb_000230_490 Hb_066293_010 Hb_066293_010 Hb_000347_320--Hb_066293_010 Hb_000920_100 Hb_000920_100 Hb_000347_320--Hb_000920_100 Hb_000679_320 Hb_000679_320 Hb_022693_020--Hb_000679_320 Hb_003018_150 Hb_003018_150 Hb_022693_020--Hb_003018_150 Hb_009393_140 Hb_009393_140 Hb_022693_020--Hb_009393_140 Hb_000359_160 Hb_000359_160 Hb_022693_020--Hb_000359_160 Hb_001541_280 Hb_001541_280 Hb_022693_020--Hb_001541_280 Hb_022693_020--Hb_020141_030 Hb_002613_040 Hb_002613_040 Hb_114917_010--Hb_002613_040 Hb_114917_010--Hb_003097_220 Hb_003058_170 Hb_003058_170 Hb_114917_010--Hb_003058_170 Hb_020378_020 Hb_020378_020 Hb_114917_010--Hb_020378_020 Hb_028396_020 Hb_028396_020 Hb_114917_010--Hb_028396_020 Hb_001916_150 Hb_001916_150 Hb_114917_010--Hb_001916_150 Hb_002010_110 Hb_002010_110 Hb_001221_400--Hb_002010_110 Hb_000140_060 Hb_000140_060 Hb_001221_400--Hb_000140_060 Hb_002811_050 Hb_002811_050 Hb_001221_400--Hb_002811_050 Hb_012799_190 Hb_012799_190 Hb_001221_400--Hb_012799_190 Hb_000056_110 Hb_000056_110 Hb_001221_400--Hb_000056_110 Hb_003006_090 Hb_003006_090 Hb_001221_400--Hb_003006_090 Hb_000208_270 Hb_000208_270 Hb_020141_030--Hb_000208_270 Hb_000787_210 Hb_000787_210 Hb_020141_030--Hb_000787_210 Hb_020141_030--Hb_001541_280 Hb_020141_030--Hb_003018_150 Hb_002814_010 Hb_002814_010 Hb_020141_030--Hb_002814_010 Hb_020141_030--Hb_003058_170 Hb_006355_060 Hb_006355_060 Hb_003097_220--Hb_006355_060 Hb_003097_220--Hb_002613_040 Hb_012239_060 Hb_012239_060 Hb_003097_220--Hb_012239_060 Hb_005057_030 Hb_005057_030 Hb_003097_220--Hb_005057_030 Hb_005725_160 Hb_005725_160 Hb_003097_220--Hb_005725_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.247046 2.34004 1.77239 4.81501 0.0844901 0.0579652
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.424822 0.459675 0.180102 0.182234 9.10766

CAGE analysis