Hb_002739_030

Information

Type transcription factor
Description TF Family: HB
Location Contig2739: 26902-31041
Sequence    

Annotation

kegg
ID csv:101205899
description homeobox-leucine zipper protein HDG11-like
nr
ID XP_004140733.2
description PREDICTED: homeobox-leucine zipper protein HDG11 isoform X2 [Cucumis sativus]
swissprot
ID Q9FX31
description Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=1 SV=1
trembl
ID A0A0A0L656
description Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187250 PE=4 SV=1
Gene Ontology
ID GO:0008289
description homeobox-leucine zipper protein hdg11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002739_030 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG11 isoform X2 [Cucumis sativus]
2 Hb_140902_010 0.249645288 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
3 Hb_001123_240 0.3045243777 - - JAZ10 [Hevea brasiliensis]
4 Hb_002835_430 0.3170645867 - - Alliin lyase precursor, putative [Ricinus communis]
5 Hb_002897_100 0.3526072026 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_000220_030 0.3533440503 - - PREDICTED: amino-acid permease BAT1 homolog isoform X2 [Jatropha curcas]
7 Hb_032717_070 0.3539907825 - - PREDICTED: mucin-2-like [Jatropha curcas]
8 Hb_001671_050 0.3540961268 - - ccd1, putative [Ricinus communis]
9 Hb_007253_010 0.3586656077 - - syntaxin, putative [Ricinus communis]
10 Hb_004994_250 0.3595749706 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB6 [Jatropha curcas]
11 Hb_000529_150 0.3596309189 - - protein with unknown function [Ricinus communis]
12 Hb_002097_220 0.36030834 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Sesamum indicum]
13 Hb_015807_030 0.3630737818 - - PREDICTED: protein NDR1-like [Jatropha curcas]
14 Hb_004965_050 0.3634849905 - - PREDICTED: uncharacterized protein LOC105645055 [Jatropha curcas]
15 Hb_000574_300 0.3683369201 - - receptor-kinase, putative [Ricinus communis]
16 Hb_006545_020 0.3693638799 - - multicopper oxidase, putative [Ricinus communis]
17 Hb_000046_310 0.3695787717 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
18 Hb_015475_010 0.3702639891 - - hypothetical protein VITISV_034342 [Vitis vinifera]
19 Hb_065161_010 0.3718869861 - - conserved hypothetical protein [Ricinus communis]
20 Hb_104764_010 0.3721480193 - - hypothetical protein JCGZ_16024 [Jatropha curcas]

Gene co-expression network

sample Hb_002739_030 Hb_002739_030 Hb_140902_010 Hb_140902_010 Hb_002739_030--Hb_140902_010 Hb_001123_240 Hb_001123_240 Hb_002739_030--Hb_001123_240 Hb_002835_430 Hb_002835_430 Hb_002739_030--Hb_002835_430 Hb_002897_100 Hb_002897_100 Hb_002739_030--Hb_002897_100 Hb_000220_030 Hb_000220_030 Hb_002739_030--Hb_000220_030 Hb_032717_070 Hb_032717_070 Hb_002739_030--Hb_032717_070 Hb_140902_010--Hb_002835_430 Hb_000649_100 Hb_000649_100 Hb_140902_010--Hb_000649_100 Hb_014613_010 Hb_014613_010 Hb_140902_010--Hb_014613_010 Hb_000802_110 Hb_000802_110 Hb_140902_010--Hb_000802_110 Hb_140902_010--Hb_001123_240 Hb_001123_240--Hb_002835_430 Hb_000788_060 Hb_000788_060 Hb_001123_240--Hb_000788_060 Hb_075247_010 Hb_075247_010 Hb_001123_240--Hb_075247_010 Hb_004162_060 Hb_004162_060 Hb_001123_240--Hb_004162_060 Hb_004453_070 Hb_004453_070 Hb_001123_240--Hb_004453_070 Hb_023344_070 Hb_023344_070 Hb_001123_240--Hb_023344_070 Hb_002835_430--Hb_000788_060 Hb_005306_010 Hb_005306_010 Hb_002835_430--Hb_005306_010 Hb_000042_220 Hb_000042_220 Hb_002835_430--Hb_000042_220 Hb_006907_080 Hb_006907_080 Hb_002835_430--Hb_006907_080 Hb_001242_050 Hb_001242_050 Hb_002835_430--Hb_001242_050 Hb_001085_300 Hb_001085_300 Hb_002897_100--Hb_001085_300 Hb_007253_010 Hb_007253_010 Hb_002897_100--Hb_007253_010 Hb_000152_760 Hb_000152_760 Hb_002897_100--Hb_000152_760 Hb_002107_100 Hb_002107_100 Hb_002897_100--Hb_002107_100 Hb_104920_010 Hb_104920_010 Hb_002897_100--Hb_104920_010 Hb_000421_230 Hb_000421_230 Hb_002897_100--Hb_000421_230 Hb_000270_180 Hb_000270_180 Hb_000220_030--Hb_000270_180 Hb_000009_520 Hb_000009_520 Hb_000220_030--Hb_000009_520 Hb_000193_260 Hb_000193_260 Hb_000220_030--Hb_000193_260 Hb_000648_050 Hb_000648_050 Hb_000220_030--Hb_000648_050 Hb_000017_260 Hb_000017_260 Hb_000220_030--Hb_000017_260 Hb_002534_130 Hb_002534_130 Hb_000220_030--Hb_002534_130 Hb_005062_080 Hb_005062_080 Hb_032717_070--Hb_005062_080 Hb_000038_120 Hb_000038_120 Hb_032717_070--Hb_000038_120 Hb_009571_010 Hb_009571_010 Hb_032717_070--Hb_009571_010 Hb_021576_020 Hb_021576_020 Hb_032717_070--Hb_021576_020 Hb_005725_050 Hb_005725_050 Hb_032717_070--Hb_005725_050 Hb_007919_020 Hb_007919_020 Hb_032717_070--Hb_007919_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0534445 0.0748279 0.0681107 0.00900927 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0613117 0 0.0611301 0.0063926 0

CAGE analysis