Hb_032717_070

Information

Type -
Description -
Location Contig32717: 152188-153108
Sequence    

Annotation

kegg
ID rcu:RCOM_0770460
description hypothetical protein
nr
ID XP_012075750.1
description PREDICTED: mucin-2-like [Jatropha curcas]
swissprot
ID Q5Q0H2
description Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2
trembl
ID A0A067KF76
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09169 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032717_070 0.0 - - PREDICTED: mucin-2-like [Jatropha curcas]
2 Hb_005062_080 0.257125902 - - MLO-like protein 4 [Gossypium arboreum]
3 Hb_000038_120 0.2809360998 - - PREDICTED: endoglucanase 9-like [Jatropha curcas]
4 Hb_009571_010 0.2829704522 - - early-responsive to dehydration family protein [Populus trichocarpa]
5 Hb_021576_020 0.2858480168 - - PREDICTED: uncharacterized protein LOC104426132 [Eucalyptus grandis]
6 Hb_005725_050 0.2995833047 - - PREDICTED: U-box domain-containing protein 30-like [Jatropha curcas]
7 Hb_007919_020 0.3004188339 - - electron transporter, putative [Ricinus communis]
8 Hb_011930_150 0.306123337 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
9 Hb_001638_180 0.3079063764 - - PREDICTED: D-arabinono-1,4-lactone oxidase-like [Jatropha curcas]
10 Hb_005306_010 0.3107066266 - - -
11 Hb_003464_070 0.3113829852 transcription factor TF Family: Trihelix PREDICTED: stress response protein NST1 [Jatropha curcas]
12 Hb_000010_310 0.3123614123 - - PREDICTED: probable pectate lyase 18 [Populus euphratica]
13 Hb_002811_280 0.3146931395 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
14 Hb_000926_100 0.3172189265 - - hypothetical protein B456_007G076800 [Gossypium raimondii]
15 Hb_003927_110 0.3182887246 - - hypothetical protein PRUPE_ppa001478mg [Prunus persica]
16 Hb_002631_190 0.3209743635 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
17 Hb_009748_010 0.3220574181 - - PREDICTED: endoglucanase 6 [Jatropha curcas]
18 Hb_000742_160 0.3243485802 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Jatropha curcas]
19 Hb_002998_070 0.3266112445 - - hypothetical protein CARUB_v10019139mg, partial [Capsella rubella]
20 Hb_080128_020 0.329050171 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_032717_070 Hb_032717_070 Hb_005062_080 Hb_005062_080 Hb_032717_070--Hb_005062_080 Hb_000038_120 Hb_000038_120 Hb_032717_070--Hb_000038_120 Hb_009571_010 Hb_009571_010 Hb_032717_070--Hb_009571_010 Hb_021576_020 Hb_021576_020 Hb_032717_070--Hb_021576_020 Hb_005725_050 Hb_005725_050 Hb_032717_070--Hb_005725_050 Hb_007919_020 Hb_007919_020 Hb_032717_070--Hb_007919_020 Hb_000579_020 Hb_000579_020 Hb_005062_080--Hb_000579_020 Hb_003927_110 Hb_003927_110 Hb_005062_080--Hb_003927_110 Hb_005062_080--Hb_007919_020 Hb_000926_100 Hb_000926_100 Hb_005062_080--Hb_000926_100 Hb_000302_090 Hb_000302_090 Hb_005062_080--Hb_000302_090 Hb_011930_150 Hb_011930_150 Hb_000038_120--Hb_011930_150 Hb_012362_030 Hb_012362_030 Hb_000038_120--Hb_012362_030 Hb_004088_040 Hb_004088_040 Hb_000038_120--Hb_004088_040 Hb_135757_020 Hb_135757_020 Hb_000038_120--Hb_135757_020 Hb_001008_200 Hb_001008_200 Hb_000038_120--Hb_001008_200 Hb_001051_070 Hb_001051_070 Hb_000038_120--Hb_001051_070 Hb_000883_170 Hb_000883_170 Hb_009571_010--Hb_000883_170 Hb_083940_010 Hb_083940_010 Hb_009571_010--Hb_083940_010 Hb_009571_010--Hb_007919_020 Hb_001946_220 Hb_001946_220 Hb_009571_010--Hb_001946_220 Hb_000368_030 Hb_000368_030 Hb_009571_010--Hb_000368_030 Hb_000010_300 Hb_000010_300 Hb_009571_010--Hb_000010_300 Hb_001554_010 Hb_001554_010 Hb_021576_020--Hb_001554_010 Hb_002998_070 Hb_002998_070 Hb_021576_020--Hb_002998_070 Hb_007904_240 Hb_007904_240 Hb_021576_020--Hb_007904_240 Hb_000069_770 Hb_000069_770 Hb_021576_020--Hb_000069_770 Hb_005306_010 Hb_005306_010 Hb_021576_020--Hb_005306_010 Hb_021576_020--Hb_000926_100 Hb_000139_140 Hb_000139_140 Hb_005725_050--Hb_000139_140 Hb_135757_010 Hb_135757_010 Hb_005725_050--Hb_135757_010 Hb_000174_140 Hb_000174_140 Hb_005725_050--Hb_000174_140 Hb_000009_140 Hb_000009_140 Hb_005725_050--Hb_000009_140 Hb_000735_080 Hb_000735_080 Hb_005725_050--Hb_000735_080 Hb_001021_070 Hb_001021_070 Hb_005725_050--Hb_001021_070 Hb_007919_020--Hb_001946_220 Hb_000270_180 Hb_000270_180 Hb_007919_020--Hb_000270_180 Hb_007919_020--Hb_000368_030 Hb_001205_080 Hb_001205_080 Hb_007919_020--Hb_001205_080 Hb_000742_010 Hb_000742_010 Hb_007919_020--Hb_000742_010 Hb_000648_050 Hb_000648_050 Hb_007919_020--Hb_000648_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.055192 0.0246336 0.111375 0.246443 0.0245905 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112413 0 0.161787 0.124696 0

CAGE analysis