Hb_001934_040

Information

Type -
Description -
Location Contig1934: 26704-30736
Sequence    

Annotation

kegg
ID cic:CICLE_v10016475mg
description hypothetical protein
nr
ID XP_012072346.1
description PREDICTED: vacuolar iron transporter 1-like [Jatropha curcas]
swissprot
ID Q9ZUA5
description Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1
trembl
ID A0A067KPT5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04790 PE=4 SV=1
Gene Ontology
ID GO:0005623
description vacuolar iron transporter 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19301: 26555-30780
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001934_040 0.0 - - PREDICTED: vacuolar iron transporter 1-like [Jatropha curcas]
2 Hb_002081_060 0.125024286 - - cyclin d, putative [Ricinus communis]
3 Hb_001761_010 0.1268308059 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
4 Hb_000334_120 0.1299962253 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
5 Hb_000907_140 0.1315682401 - - PREDICTED: annexin D5-like [Jatropha curcas]
6 Hb_000343_010 0.1329046414 - - F3F9.11 [Arabidopsis thaliana]
7 Hb_000664_080 0.1331931843 - - PREDICTED: NADP-dependent malic enzyme isoform X2 [Jatropha curcas]
8 Hb_002205_180 0.137649694 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
9 Hb_000189_350 0.1391239182 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 3 [Jatropha curcas]
10 Hb_003109_010 0.1397576169 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
11 Hb_007163_030 0.1425087131 - - hypothetical protein RCOM_0187400 [Ricinus communis]
12 Hb_000343_020 0.1425283727 - - PREDICTED: putative Peroxidase 48 [Jatropha curcas]
13 Hb_033041_010 0.1426196305 - - PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
14 Hb_007943_180 0.1438402413 - - PREDICTED: uncharacterized protein LOC105637734 [Jatropha curcas]
15 Hb_000265_100 0.1448252728 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
16 Hb_000954_040 0.1450761447 - - PREDICTED: metal tolerance protein 4 [Jatropha curcas]
17 Hb_008643_220 0.1455455454 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
18 Hb_009339_040 0.1456665564 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002871_130 0.1457951897 - - PREDICTED: non-structural maintenance of chromosomes element 4 homolog A isoform X2 [Jatropha curcas]
20 Hb_000028_530 0.1484369713 - - Protein regulator of cytokinesis, putative [Ricinus communis]

Gene co-expression network

sample Hb_001934_040 Hb_001934_040 Hb_002081_060 Hb_002081_060 Hb_001934_040--Hb_002081_060 Hb_001761_010 Hb_001761_010 Hb_001934_040--Hb_001761_010 Hb_000334_120 Hb_000334_120 Hb_001934_040--Hb_000334_120 Hb_000907_140 Hb_000907_140 Hb_001934_040--Hb_000907_140 Hb_000343_010 Hb_000343_010 Hb_001934_040--Hb_000343_010 Hb_000664_080 Hb_000664_080 Hb_001934_040--Hb_000664_080 Hb_000205_180 Hb_000205_180 Hb_002081_060--Hb_000205_180 Hb_001310_060 Hb_001310_060 Hb_002081_060--Hb_001310_060 Hb_001999_160 Hb_001999_160 Hb_002081_060--Hb_001999_160 Hb_001369_550 Hb_001369_550 Hb_002081_060--Hb_001369_550 Hb_004607_020 Hb_004607_020 Hb_002081_060--Hb_004607_020 Hb_003626_020 Hb_003626_020 Hb_002081_060--Hb_003626_020 Hb_012753_150 Hb_012753_150 Hb_001761_010--Hb_012753_150 Hb_000028_530 Hb_000028_530 Hb_001761_010--Hb_000028_530 Hb_000365_210 Hb_000365_210 Hb_001761_010--Hb_000365_210 Hb_000960_120 Hb_000960_120 Hb_001761_010--Hb_000960_120 Hb_002232_310 Hb_002232_310 Hb_001761_010--Hb_002232_310 Hb_024973_020 Hb_024973_020 Hb_001761_010--Hb_024973_020 Hb_000334_120--Hb_000028_530 Hb_033041_010 Hb_033041_010 Hb_000334_120--Hb_033041_010 Hb_001584_360 Hb_001584_360 Hb_000334_120--Hb_001584_360 Hb_000189_350 Hb_000189_350 Hb_000334_120--Hb_000189_350 Hb_000265_100 Hb_000265_100 Hb_000334_120--Hb_000265_100 Hb_005276_090 Hb_005276_090 Hb_000334_120--Hb_005276_090 Hb_007101_040 Hb_007101_040 Hb_000907_140--Hb_007101_040 Hb_000027_160 Hb_000027_160 Hb_000907_140--Hb_000027_160 Hb_000956_050 Hb_000956_050 Hb_000907_140--Hb_000956_050 Hb_007943_180 Hb_007943_180 Hb_000907_140--Hb_007943_180 Hb_000914_140 Hb_000914_140 Hb_000907_140--Hb_000914_140 Hb_006615_220 Hb_006615_220 Hb_000343_010--Hb_006615_220 Hb_000035_150 Hb_000035_150 Hb_000343_010--Hb_000035_150 Hb_007643_060 Hb_007643_060 Hb_000343_010--Hb_007643_060 Hb_007951_020 Hb_007951_020 Hb_000343_010--Hb_007951_020 Hb_000343_010--Hb_004607_020 Hb_000343_010--Hb_003626_020 Hb_002170_060 Hb_002170_060 Hb_000664_080--Hb_002170_060 Hb_008643_220 Hb_008643_220 Hb_000664_080--Hb_008643_220 Hb_004459_030 Hb_004459_030 Hb_000664_080--Hb_004459_030 Hb_002243_030 Hb_002243_030 Hb_000664_080--Hb_002243_030 Hb_000032_080 Hb_000032_080 Hb_000664_080--Hb_000032_080 Hb_000664_080--Hb_003626_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.101159 0.678974 13.524 3.76615 0.185077 0.093455
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.214558 0.393625 0 2.18843 1.6856

CAGE analysis