Hb_000907_140

Information

Type -
Description -
Location Contig907: 166534-175820
Sequence    

Annotation

kegg
ID pop:POPTR_0012s03880g
description POPTRDRAFT_569376; annexin-like family protein
nr
ID XP_012087654.1
description PREDICTED: annexin D5-like [Jatropha curcas]
swissprot
ID Q9C9X3
description Annexin D5 OS=Arabidopsis thaliana GN=ANN5 PE=2 SV=2
trembl
ID A0A067JXP3
description Annexin OS=Jatropha curcas GN=JCGZ_25425 PE=3 SV=1
Gene Ontology
ID GO:0005509
description annexin d5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62059: 166402-175624 , PASA_asmbl_62060: 168079-168291 , PASA_asmbl_62061: 173967-174209
cDNA
(Sanger)
(ID:Location)		 010_M05.ab1: 166787-175563 , 052_M02.ab1: 167244-175624

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000907_140 0.0 - - PREDICTED: annexin D5-like [Jatropha curcas]
2 Hb_007101_040 0.1162620845 - - PREDICTED: MLP-like protein 423 [Populus euphratica]
3 Hb_000027_160 0.1220490939 - - PREDICTED: probable protein phosphatase 2C 15 isoform X3 [Jatropha curcas]
4 Hb_000956_050 0.1227391592 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
5 Hb_001934_040 0.1315682401 - - PREDICTED: vacuolar iron transporter 1-like [Jatropha curcas]
6 Hb_007943_180 0.1336874853 - - PREDICTED: uncharacterized protein LOC105637734 [Jatropha curcas]
7 Hb_000914_140 0.1369221678 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
8 Hb_004223_170 0.1383419259 - - PREDICTED: ATP sulfurylase 2 [Jatropha curcas]
9 Hb_000343_010 0.1434806339 - - F3F9.11 [Arabidopsis thaliana]
10 Hb_009339_040 0.14692336 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008643_220 0.1477057985 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
12 Hb_001307_020 0.1486272537 - - electron carrier, putative [Ricinus communis]
13 Hb_001571_080 0.1496808647 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
14 Hb_003020_190 0.1505584651 - - PREDICTED: methylsterol monooxygenase 2-2 [Jatropha curcas]
15 Hb_071674_010 0.1507973267 transcription factor TF Family: WRKY hypothetical protein POPTR_0006s10950g [Populus trichocarpa]
16 Hb_003109_010 0.1510800409 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
17 Hb_000349_250 0.1519640792 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
18 Hb_004109_100 0.1519884512 - - Interactor of constitutive active rops 1 isoform 1 [Theobroma cacao]
19 Hb_005568_140 0.1520923994 - - ATP binding protein, putative [Ricinus communis]
20 Hb_012753_150 0.1527169428 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]

Gene co-expression network

sample Hb_000907_140 Hb_000907_140 Hb_007101_040 Hb_007101_040 Hb_000907_140--Hb_007101_040 Hb_000027_160 Hb_000027_160 Hb_000907_140--Hb_000027_160 Hb_000956_050 Hb_000956_050 Hb_000907_140--Hb_000956_050 Hb_001934_040 Hb_001934_040 Hb_000907_140--Hb_001934_040 Hb_007943_180 Hb_007943_180 Hb_000907_140--Hb_007943_180 Hb_000914_140 Hb_000914_140 Hb_000907_140--Hb_000914_140 Hb_003573_050 Hb_003573_050 Hb_007101_040--Hb_003573_050 Hb_001437_260 Hb_001437_260 Hb_007101_040--Hb_001437_260 Hb_004007_130 Hb_004007_130 Hb_007101_040--Hb_004007_130 Hb_007101_040--Hb_000914_140 Hb_007101_040--Hb_000956_050 Hb_000349_250 Hb_000349_250 Hb_000027_160--Hb_000349_250 Hb_024714_090 Hb_024714_090 Hb_000027_160--Hb_024714_090 Hb_002053_180 Hb_002053_180 Hb_000027_160--Hb_002053_180 Hb_001571_080 Hb_001571_080 Hb_000027_160--Hb_001571_080 Hb_000086_470 Hb_000086_470 Hb_000027_160--Hb_000086_470 Hb_000905_100 Hb_000905_100 Hb_000027_160--Hb_000905_100 Hb_000190_220 Hb_000190_220 Hb_000956_050--Hb_000190_220 Hb_003228_050 Hb_003228_050 Hb_000956_050--Hb_003228_050 Hb_003813_090 Hb_003813_090 Hb_000956_050--Hb_003813_090 Hb_000956_050--Hb_024714_090 Hb_002311_090 Hb_002311_090 Hb_000956_050--Hb_002311_090 Hb_002081_060 Hb_002081_060 Hb_001934_040--Hb_002081_060 Hb_001761_010 Hb_001761_010 Hb_001934_040--Hb_001761_010 Hb_000334_120 Hb_000334_120 Hb_001934_040--Hb_000334_120 Hb_000343_010 Hb_000343_010 Hb_001934_040--Hb_000343_010 Hb_000664_080 Hb_000664_080 Hb_001934_040--Hb_000664_080 Hb_004531_080 Hb_004531_080 Hb_007943_180--Hb_004531_080 Hb_003020_190 Hb_003020_190 Hb_007943_180--Hb_003020_190 Hb_003095_100 Hb_003095_100 Hb_007943_180--Hb_003095_100 Hb_001123_310 Hb_001123_310 Hb_007943_180--Hb_001123_310 Hb_003109_010 Hb_003109_010 Hb_007943_180--Hb_003109_010 Hb_000120_300 Hb_000120_300 Hb_007943_180--Hb_000120_300 Hb_000914_140--Hb_003573_050 Hb_002817_030 Hb_002817_030 Hb_000914_140--Hb_002817_030 Hb_001828_110 Hb_001828_110 Hb_000914_140--Hb_001828_110 Hb_002311_500 Hb_002311_500 Hb_000914_140--Hb_002311_500 Hb_000914_140--Hb_002053_180 Hb_003759_040 Hb_003759_040 Hb_000914_140--Hb_003759_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.817788 23.9657 171.034 62.178 1.42345 0.728618
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.13575 5.99486 1.71493 22.1759 37.3969

CAGE analysis