Hb_001221_270

Information

Type -
Description -
Location Contig1221: 212209-212622
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016740
description pyridoxal phosphate-dependent transferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_270 0.0 - - -
2 Hb_002733_010 0.2357624405 - - -
3 Hb_001913_020 0.3101679499 - - conserved hypothetical protein [Ricinus communis]
4 Hb_108706_010 0.3207010421 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
5 Hb_159921_010 0.3417945093 - - -
6 Hb_004079_020 0.3452832869 - - hypothetical protein glysoja_031528 [Glycine soja]
7 Hb_078897_010 0.3457329569 - - hypothetical protein POPTR_0012s044902g, partial [Populus trichocarpa]
8 Hb_001366_120 0.3560652478 - - unknown [Zea mays]
9 Hb_015707_010 0.3579719599 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
10 Hb_001124_040 0.3624225828 - - PREDICTED: uncharacterized protein LOC103413595 [Malus domestica]
11 Hb_001606_080 0.3632348525 - - PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X2 [Jatropha curcas]
12 Hb_000252_030 0.3639464136 - - Heme-binding protein, putative [Ricinus communis]
13 Hb_001008_040 0.3645576042 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
14 Hb_022132_040 0.3700406744 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
15 Hb_001009_130 0.3715734608 - - hypothetical protein JCGZ_11336 [Jatropha curcas]
16 Hb_000000_100 0.3720840491 - - hypothetical protein POPTR_0002s13260g [Populus trichocarpa]
17 Hb_000357_120 0.3722566195 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Jatropha curcas]
18 Hb_003881_050 0.3861133448 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
19 Hb_005914_240 0.3890371343 - - PREDICTED: oxidation resistance protein 1 [Jatropha curcas]
20 Hb_001021_060 0.3905377402 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001221_270 Hb_001221_270 Hb_002733_010 Hb_002733_010 Hb_001221_270--Hb_002733_010 Hb_001913_020 Hb_001913_020 Hb_001221_270--Hb_001913_020 Hb_108706_010 Hb_108706_010 Hb_001221_270--Hb_108706_010 Hb_159921_010 Hb_159921_010 Hb_001221_270--Hb_159921_010 Hb_004079_020 Hb_004079_020 Hb_001221_270--Hb_004079_020 Hb_078897_010 Hb_078897_010 Hb_001221_270--Hb_078897_010 Hb_002733_010--Hb_001913_020 Hb_002102_020 Hb_002102_020 Hb_002733_010--Hb_002102_020 Hb_010174_080 Hb_010174_080 Hb_002733_010--Hb_010174_080 Hb_120155_010 Hb_120155_010 Hb_002733_010--Hb_120155_010 Hb_000062_350 Hb_000062_350 Hb_002733_010--Hb_000062_350 Hb_005656_030 Hb_005656_030 Hb_001913_020--Hb_005656_030 Hb_000413_290 Hb_000413_290 Hb_001913_020--Hb_000413_290 Hb_010712_070 Hb_010712_070 Hb_001913_020--Hb_010712_070 Hb_002157_200 Hb_002157_200 Hb_001913_020--Hb_002157_200 Hb_022132_040 Hb_022132_040 Hb_108706_010--Hb_022132_040 Hb_108706_010--Hb_120155_010 Hb_017434_060 Hb_017434_060 Hb_108706_010--Hb_017434_060 Hb_002025_310 Hb_002025_310 Hb_108706_010--Hb_002025_310 Hb_055384_010 Hb_055384_010 Hb_108706_010--Hb_055384_010 Hb_000853_400 Hb_000853_400 Hb_159921_010--Hb_000853_400 Hb_001008_040 Hb_001008_040 Hb_159921_010--Hb_001008_040 Hb_000432_060 Hb_000432_060 Hb_159921_010--Hb_000432_060 Hb_122408_010 Hb_122408_010 Hb_159921_010--Hb_122408_010 Hb_003327_040 Hb_003327_040 Hb_159921_010--Hb_003327_040 Hb_002666_020 Hb_002666_020 Hb_159921_010--Hb_002666_020 Hb_005914_240 Hb_005914_240 Hb_004079_020--Hb_005914_240 Hb_006344_010 Hb_006344_010 Hb_004079_020--Hb_006344_010 Hb_140572_010 Hb_140572_010 Hb_004079_020--Hb_140572_010 Hb_123521_010 Hb_123521_010 Hb_004079_020--Hb_123521_010 Hb_001277_310 Hb_001277_310 Hb_004079_020--Hb_001277_310 Hb_000544_160 Hb_000544_160 Hb_078897_010--Hb_000544_160 Hb_001366_120 Hb_001366_120 Hb_078897_010--Hb_001366_120 Hb_078897_010--Hb_010712_070 Hb_001711_050 Hb_001711_050 Hb_078897_010--Hb_001711_050 Hb_000312_050 Hb_000312_050 Hb_078897_010--Hb_000312_050 Hb_002722_010 Hb_002722_010 Hb_078897_010--Hb_002722_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0789182 0.0689336 0.132804 0 0 0.143393
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.237155 0.062442 0

CAGE analysis