Hb_010712_070

Information

Type -
Description -
Location Contig10712: 31379-31921
Sequence    

Annotation

kegg
ID -
description -
nr
ID EMT29720.1
description Galactoside 2-alpha-L-fucosyltransferase [Aegilops tauschii]
swissprot
ID -
description -
trembl
ID M8BXL1
description Galactoside 2-alpha-L-fucosyltransferase OS=Aegilops tauschii GN=F775_17576 PE=4 SV=1
Gene Ontology
ID GO:0016020
description galactoside 2-alpha-l-fucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010712_070 0.0 - - Galactoside 2-alpha-L-fucosyltransferase [Aegilops tauschii]
2 Hb_000544_160 0.1891415906 - - PREDICTED: phosphomethylethanolamine N-methyltransferase-like [Nelumbo nucifera]
3 Hb_078897_010 0.2039603931 - - hypothetical protein POPTR_0012s044902g, partial [Populus trichocarpa]
4 Hb_002722_010 0.2237996502 - - Disease resistance response protein, putative [Ricinus communis]
5 Hb_102632_010 0.2240389471 - - PREDICTED: CST complex subunit STN1 [Jatropha curcas]
6 Hb_000030_160 0.2383200056 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 7-like [Jatropha curcas]
7 Hb_007765_070 0.2520121496 - - PREDICTED: mitochondrial uncoupling protein 2 [Jatropha curcas]
8 Hb_004125_010 0.2559383384 - - PREDICTED: uncharacterized protein LOC105632163 [Jatropha curcas]
9 Hb_029921_020 0.2572469632 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
10 Hb_004032_160 0.2580079463 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
11 Hb_000571_010 0.2593484912 - - PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Gossypium raimondii]
12 Hb_024836_010 0.2601443545 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
13 Hb_003688_040 0.2607978444 - - -
14 Hb_000107_470 0.2628054441 - - cellulose synthase, putative [Ricinus communis]
15 Hb_002105_010 0.2638713484 - - conserved hypothetical protein [Ricinus communis]
16 Hb_008511_060 0.2653218851 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
17 Hb_003038_250 0.268140629 - - PREDICTED: uncharacterized protein LOC105650395 [Jatropha curcas]
18 Hb_004725_030 0.2682807913 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X4 [Jatropha curcas]
19 Hb_005784_070 0.2707885807 - - PREDICTED: protein TONSOKU isoform X2 [Jatropha curcas]
20 Hb_000070_030 0.2732068459 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]

Gene co-expression network

sample Hb_010712_070 Hb_010712_070 Hb_000544_160 Hb_000544_160 Hb_010712_070--Hb_000544_160 Hb_078897_010 Hb_078897_010 Hb_010712_070--Hb_078897_010 Hb_002722_010 Hb_002722_010 Hb_010712_070--Hb_002722_010 Hb_102632_010 Hb_102632_010 Hb_010712_070--Hb_102632_010 Hb_000030_160 Hb_000030_160 Hb_010712_070--Hb_000030_160 Hb_007765_070 Hb_007765_070 Hb_010712_070--Hb_007765_070 Hb_000544_160--Hb_078897_010 Hb_000544_160--Hb_002722_010 Hb_006921_040 Hb_006921_040 Hb_000544_160--Hb_006921_040 Hb_000107_470 Hb_000107_470 Hb_000544_160--Hb_000107_470 Hb_001366_120 Hb_001366_120 Hb_000544_160--Hb_001366_120 Hb_078897_010--Hb_001366_120 Hb_001711_050 Hb_001711_050 Hb_078897_010--Hb_001711_050 Hb_000312_050 Hb_000312_050 Hb_078897_010--Hb_000312_050 Hb_078897_010--Hb_002722_010 Hb_000080_160 Hb_000080_160 Hb_002722_010--Hb_000080_160 Hb_002722_010--Hb_000030_160 Hb_021650_020 Hb_021650_020 Hb_002722_010--Hb_021650_020 Hb_000571_010 Hb_000571_010 Hb_102632_010--Hb_000571_010 Hb_000206_190 Hb_000206_190 Hb_102632_010--Hb_000206_190 Hb_002307_080 Hb_002307_080 Hb_102632_010--Hb_002307_080 Hb_000077_220 Hb_000077_220 Hb_102632_010--Hb_000077_220 Hb_002471_180 Hb_002471_180 Hb_102632_010--Hb_002471_180 Hb_004032_160 Hb_004032_160 Hb_000030_160--Hb_004032_160 Hb_005784_070 Hb_005784_070 Hb_000030_160--Hb_005784_070 Hb_000883_170 Hb_000883_170 Hb_000030_160--Hb_000883_170 Hb_000009_220 Hb_000009_220 Hb_000030_160--Hb_000009_220 Hb_004003_030 Hb_004003_030 Hb_000030_160--Hb_004003_030 Hb_007793_050 Hb_007793_050 Hb_000030_160--Hb_007793_050 Hb_008511_060 Hb_008511_060 Hb_007765_070--Hb_008511_060 Hb_000270_870 Hb_000270_870 Hb_007765_070--Hb_000270_870 Hb_004724_470 Hb_004724_470 Hb_007765_070--Hb_004724_470 Hb_048476_150 Hb_048476_150 Hb_007765_070--Hb_048476_150 Hb_024836_010 Hb_024836_010 Hb_007765_070--Hb_024836_010 Hb_007765_070--Hb_002471_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.559697 0.146897 0.91063 0.412895 0.101604 0.309265
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.31801 0.114433 0.175697

CAGE analysis