Hb_005914_240

Information

Type -
Description -
Location Contig5914: 159801-161148
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa010889mg
description hypothetical protein
nr
ID XP_012077598.1
description PREDICTED: oxidation resistance protein 1 [Jatropha curcas]
swissprot
ID Q4V8B0
description Oxidation resistance protein 1 OS=Rattus norvegicus GN=Oxr1 PE=2 SV=3
trembl
ID A0A067KND2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12863 PE=4 SV=1
Gene Ontology
ID GO:0005622
description oxidation resistance protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005914_240 0.0 - - PREDICTED: oxidation resistance protein 1 [Jatropha curcas]
2 Hb_004079_020 0.279821563 - - hypothetical protein glysoja_031528 [Glycine soja]
3 Hb_001021_060 0.2886653589 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
4 Hb_006344_010 0.3036701826 - - -
5 Hb_000544_140 0.3196839659 - - PREDICTED: uncharacterized protein LOC101245866 [Solanum lycopersicum]
6 Hb_140572_010 0.3236627007 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
7 Hb_063912_010 0.326149926 - - PREDICTED: elongation factor 1-alpha-like, partial [Cucumis sativus]
8 Hb_008147_010 0.3388153529 - - hypothetical protein, partial [Pseudomonas fluorescens]
9 Hb_010626_020 0.3414348625 - - -
10 Hb_007753_020 0.3447394579 - - -
11 Hb_000922_130 0.3542931349 - - hypothetical protein POPTR_0008s04925g [Populus trichocarpa]
12 Hb_176022_010 0.3554685617 - - -
13 Hb_009265_020 0.3658122365 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_005735_010 0.3706671367 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
15 Hb_002490_050 0.3761932442 - - Os02g0182500, partial [Oryza sativa Japonica Group]
16 Hb_001195_390 0.3771586208 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
17 Hb_000370_010 0.3808580487 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
18 Hb_000445_080 0.3822250729 transcription factor TF Family: MIKC PREDICTED: floral homeotic protein PMADS 2 [Jatropha curcas]
19 Hb_001650_010 0.3825888636 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
20 Hb_006495_080 0.3825926515 - - hypothetical protein PRUPE_ppb025438mg, partial [Prunus persica]

Gene co-expression network

sample Hb_005914_240 Hb_005914_240 Hb_004079_020 Hb_004079_020 Hb_005914_240--Hb_004079_020 Hb_001021_060 Hb_001021_060 Hb_005914_240--Hb_001021_060 Hb_006344_010 Hb_006344_010 Hb_005914_240--Hb_006344_010 Hb_000544_140 Hb_000544_140 Hb_005914_240--Hb_000544_140 Hb_140572_010 Hb_140572_010 Hb_005914_240--Hb_140572_010 Hb_063912_010 Hb_063912_010 Hb_005914_240--Hb_063912_010 Hb_004079_020--Hb_006344_010 Hb_004079_020--Hb_140572_010 Hb_123521_010 Hb_123521_010 Hb_004079_020--Hb_123521_010 Hb_001277_310 Hb_001277_310 Hb_004079_020--Hb_001277_310 Hb_001221_270 Hb_001221_270 Hb_004079_020--Hb_001221_270 Hb_001021_060--Hb_006344_010 Hb_001021_060--Hb_140572_010 Hb_000252_030 Hb_000252_030 Hb_001021_060--Hb_000252_030 Hb_003952_140 Hb_003952_140 Hb_001021_060--Hb_003952_140 Hb_007753_020 Hb_007753_020 Hb_001021_060--Hb_007753_020 Hb_006344_010--Hb_140572_010 Hb_001195_390 Hb_001195_390 Hb_006344_010--Hb_001195_390 Hb_004413_030 Hb_004413_030 Hb_006344_010--Hb_004413_030 Hb_006344_010--Hb_001277_310 Hb_135624_010 Hb_135624_010 Hb_006344_010--Hb_135624_010 Hb_010626_020 Hb_010626_020 Hb_000544_140--Hb_010626_020 Hb_005735_010 Hb_005735_010 Hb_000544_140--Hb_005735_010 Hb_000370_010 Hb_000370_010 Hb_000544_140--Hb_000370_010 Hb_001650_010 Hb_001650_010 Hb_000544_140--Hb_001650_010 Hb_000544_140--Hb_123521_010 Hb_000544_140--Hb_001021_060 Hb_140572_010--Hb_007753_020 Hb_140572_010--Hb_001195_390 Hb_000445_080 Hb_000445_080 Hb_140572_010--Hb_000445_080 Hb_140572_010--Hb_123521_010 Hb_176022_010 Hb_176022_010 Hb_063912_010--Hb_176022_010 Hb_000922_130 Hb_000922_130 Hb_063912_010--Hb_000922_130 Hb_130788_010 Hb_130788_010 Hb_063912_010--Hb_130788_010 Hb_002490_050 Hb_002490_050 Hb_063912_010--Hb_002490_050 Hb_063912_010--Hb_001195_390 Hb_005671_030 Hb_005671_030 Hb_063912_010--Hb_005671_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0722721 0 0.0603685 0 0 0.346205
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.219586 0 0

CAGE analysis