Hb_001650_010

Information

Type -
Description -
Location Contig1650: 21419-26649
Sequence    

Annotation

kegg
ID cmo:103497647
description uncharacterized LOC103497647
nr
ID WP_042918419.1
description MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
swissprot
ID -
description -
trembl
ID C7J7N6
description Os10g0357350 protein OS=Oryza sativa subsp. japonica GN=Os10g0357350 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001650_010 0.0 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
2 Hb_172112_010 0.2187156191 - - hypothetical protein JCGZ_26322 [Jatropha curcas]
3 Hb_000544_140 0.2279625491 - - PREDICTED: uncharacterized protein LOC101245866 [Solanum lycopersicum]
4 Hb_010626_020 0.2723839499 - - -
5 Hb_005735_010 0.2778665953 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
6 Hb_005656_060 0.3286893392 - - -
7 Hb_002890_230 0.3288171112 - - hypothetical protein MTR_5g084920 [Medicago truncatula]
8 Hb_123521_010 0.329297034 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
9 Hb_000370_010 0.3309510601 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
10 Hb_000322_110 0.3343627299 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Jatropha curcas]
11 Hb_062482_010 0.3419753366 - - -
12 Hb_098466_010 0.3443364305 - - PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
13 Hb_179112_010 0.3567114089 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
14 Hb_002988_020 0.3568971479 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
15 Hb_009265_020 0.3625341492 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_001623_520 0.3692097314 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
17 Hb_000903_030 0.3721482214 - - -
18 Hb_001021_060 0.3743474395 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_000732_270 0.3771969868 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase [Jatropha curcas]
20 Hb_140572_010 0.3780057214 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]

Gene co-expression network

sample Hb_001650_010 Hb_001650_010 Hb_172112_010 Hb_172112_010 Hb_001650_010--Hb_172112_010 Hb_000544_140 Hb_000544_140 Hb_001650_010--Hb_000544_140 Hb_010626_020 Hb_010626_020 Hb_001650_010--Hb_010626_020 Hb_005735_010 Hb_005735_010 Hb_001650_010--Hb_005735_010 Hb_005656_060 Hb_005656_060 Hb_001650_010--Hb_005656_060 Hb_002890_230 Hb_002890_230 Hb_001650_010--Hb_002890_230 Hb_098466_010 Hb_098466_010 Hb_172112_010--Hb_098466_010 Hb_137153_010 Hb_137153_010 Hb_172112_010--Hb_137153_010 Hb_178607_010 Hb_178607_010 Hb_172112_010--Hb_178607_010 Hb_172112_010--Hb_005656_060 Hb_000060_120 Hb_000060_120 Hb_172112_010--Hb_000060_120 Hb_000544_140--Hb_010626_020 Hb_000544_140--Hb_005735_010 Hb_000370_010 Hb_000370_010 Hb_000544_140--Hb_000370_010 Hb_123521_010 Hb_123521_010 Hb_000544_140--Hb_123521_010 Hb_001021_060 Hb_001021_060 Hb_000544_140--Hb_001021_060 Hb_010626_020--Hb_000370_010 Hb_030630_010 Hb_030630_010 Hb_010626_020--Hb_030630_010 Hb_000204_200 Hb_000204_200 Hb_010626_020--Hb_000204_200 Hb_010626_020--Hb_123521_010 Hb_009474_010 Hb_009474_010 Hb_010626_020--Hb_009474_010 Hb_002988_020 Hb_002988_020 Hb_005735_010--Hb_002988_020 Hb_017134_020 Hb_017134_020 Hb_005735_010--Hb_017134_020 Hb_179112_010 Hb_179112_010 Hb_005735_010--Hb_179112_010 Hb_000094_060 Hb_000094_060 Hb_005735_010--Hb_000094_060 Hb_000457_160 Hb_000457_160 Hb_005656_060--Hb_000457_160 Hb_005867_080 Hb_005867_080 Hb_005656_060--Hb_005867_080 Hb_022288_020 Hb_022288_020 Hb_005656_060--Hb_022288_020 Hb_041774_010 Hb_041774_010 Hb_005656_060--Hb_041774_010 Hb_001767_020 Hb_001767_020 Hb_005656_060--Hb_001767_020 Hb_010317_030 Hb_010317_030 Hb_005656_060--Hb_010317_030 Hb_000012_300 Hb_000012_300 Hb_002890_230--Hb_000012_300 Hb_002890_230--Hb_041774_010 Hb_002890_230--Hb_005656_060 Hb_003073_130 Hb_003073_130 Hb_002890_230--Hb_003073_130 Hb_001775_040 Hb_001775_040 Hb_002890_230--Hb_001775_040 Hb_002890_230--Hb_000457_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0288426 0.172548
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0941013 0 0

CAGE analysis