Hb_017134_020

Information

Type -
Description -
Location Contig17134: 16364-16827
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0042742
description wound-induced protein win1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017134_020 0.0 - - -
2 Hb_174005_010 0.176413385 - - hypothetical protein EUGRSUZ_D00590 [Eucalyptus grandis]
3 Hb_005735_010 0.1969734166 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
4 Hb_002988_020 0.2029813353 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
5 Hb_000510_070 0.2076963383 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Beta vulgaris subsp. vulgaris]
6 Hb_000094_060 0.2124620624 - - -
7 Hb_000005_210 0.2130248266 - - -
8 Hb_000041_170 0.2130248266 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
9 Hb_000047_040 0.2130248266 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
10 Hb_000072_260 0.2130248266 - - hypothetical protein MTR_5g044090 [Medicago truncatula]
11 Hb_000081_170 0.2130248266 - - -
12 Hb_000088_250 0.2130248266 - - -
13 Hb_000110_220 0.2130248266 - - -
14 Hb_000110_360 0.2130248266 - - -
15 Hb_000111_510 0.2130248266 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_000122_170 0.2130248266 - - PREDICTED: uncharacterized protein LOC104455487 [Eucalyptus grandis]
17 Hb_000122_180 0.2130248266 - - -
18 Hb_000130_150 0.2130248266 - - -
19 Hb_000139_020 0.2130248266 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000140_180 0.2130248266 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_017134_020 Hb_017134_020 Hb_174005_010 Hb_174005_010 Hb_017134_020--Hb_174005_010 Hb_005735_010 Hb_005735_010 Hb_017134_020--Hb_005735_010 Hb_002988_020 Hb_002988_020 Hb_017134_020--Hb_002988_020 Hb_000510_070 Hb_000510_070 Hb_017134_020--Hb_000510_070 Hb_000094_060 Hb_000094_060 Hb_017134_020--Hb_000094_060 Hb_000005_210 Hb_000005_210 Hb_017134_020--Hb_000005_210 Hb_053582_010 Hb_053582_010 Hb_174005_010--Hb_053582_010 Hb_174005_010--Hb_000005_210 Hb_000041_170 Hb_000041_170 Hb_174005_010--Hb_000041_170 Hb_000047_040 Hb_000047_040 Hb_174005_010--Hb_000047_040 Hb_000072_260 Hb_000072_260 Hb_174005_010--Hb_000072_260 Hb_000081_170 Hb_000081_170 Hb_174005_010--Hb_000081_170 Hb_005735_010--Hb_002988_020 Hb_000544_140 Hb_000544_140 Hb_005735_010--Hb_000544_140 Hb_179112_010 Hb_179112_010 Hb_005735_010--Hb_179112_010 Hb_005735_010--Hb_000094_060 Hb_001650_010 Hb_001650_010 Hb_005735_010--Hb_001650_010 Hb_002988_020--Hb_179112_010 Hb_000903_030 Hb_000903_030 Hb_002988_020--Hb_000903_030 Hb_000230_340 Hb_000230_340 Hb_002988_020--Hb_000230_340 Hb_032531_050 Hb_032531_050 Hb_002988_020--Hb_032531_050 Hb_000510_070--Hb_000005_210 Hb_000510_070--Hb_000041_170 Hb_000510_070--Hb_000047_040 Hb_000510_070--Hb_000072_260 Hb_000510_070--Hb_000081_170 Hb_000088_250 Hb_000088_250 Hb_000510_070--Hb_000088_250 Hb_001125_020 Hb_001125_020 Hb_000094_060--Hb_001125_020 Hb_042026_010 Hb_042026_010 Hb_000094_060--Hb_042026_010 Hb_032419_020 Hb_032419_020 Hb_000094_060--Hb_032419_020 Hb_000094_060--Hb_174005_010 Hb_000696_320 Hb_000696_320 Hb_000094_060--Hb_000696_320 Hb_000005_210--Hb_000041_170 Hb_000005_210--Hb_000047_040 Hb_000005_210--Hb_000072_260 Hb_000005_210--Hb_000081_170 Hb_000005_210--Hb_000088_250 Hb_000110_220 Hb_000110_220 Hb_000005_210--Hb_000110_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.27235 48.8881
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.00667 3.19298 0.236276 0

CAGE analysis