Hb_005867_080

Information

Type -
Description -
Location Contig5867: 59186-62478
Sequence    

Annotation

kegg
ID rcu:RCOM_1039600
description Restin, putative
nr
ID XP_012068380.1
description PREDICTED: protein NETWORKED 2A [Jatropha curcas]
swissprot
ID P0DMS1
description Protein NETWORKED 2A OS=Arabidopsis thaliana GN=NET2A PE=2 SV=1
trembl
ID A0A067LAE9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15892 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005867_080 0.0 - - PREDICTED: protein NETWORKED 2A [Jatropha curcas]
2 Hb_001767_020 0.1689245738 - - PREDICTED: WAT1-related protein At1g68170-like, partial [Jatropha curcas]
3 Hb_005656_060 0.1784511718 - - -
4 Hb_004102_130 0.1854367114 - - conserved hypothetical protein [Ricinus communis]
5 Hb_011021_030 0.1875532088 - - PREDICTED: uncharacterized protein LOC105644390 [Jatropha curcas]
6 Hb_000208_290 0.1883264564 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 2 isoform X2 [Jatropha curcas]
7 Hb_004156_060 0.1897566451 - - neutral/alkaline invertase 1 [Hevea brasiliensis]
8 Hb_001102_110 0.1932716856 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Jatropha curcas]
9 Hb_023610_010 0.1949176701 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000176_170 0.1964991309 - - PREDICTED: tetratricopeptide repeat protein 1 [Jatropha curcas]
11 Hb_002769_040 0.1995475935 - - farnesyl-diphosphate farnesyltransferase, putative [Ricinus communis]
12 Hb_000457_160 0.200407147 - - PREDICTED: uncharacterized protein LOC105633076 [Jatropha curcas]
13 Hb_004884_060 0.2046123143 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
14 Hb_011639_050 0.2062392625 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006026_040 0.2105542152 - - PREDICTED: 60S ribosomal protein L13a-4-like [Jatropha curcas]
16 Hb_002326_050 0.2127552344 - - PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
17 Hb_000077_130 0.2137937987 - - PREDICTED: callose synthase 12 [Jatropha curcas]
18 Hb_022288_010 0.2169982294 - - ubiquitin ligase E3 alpha, putative [Ricinus communis]
19 Hb_176022_020 0.2170566473 - - cytochrome P450, putative [Ricinus communis]
20 Hb_154381_050 0.2180303463 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005867_080 Hb_005867_080 Hb_001767_020 Hb_001767_020 Hb_005867_080--Hb_001767_020 Hb_005656_060 Hb_005656_060 Hb_005867_080--Hb_005656_060 Hb_004102_130 Hb_004102_130 Hb_005867_080--Hb_004102_130 Hb_011021_030 Hb_011021_030 Hb_005867_080--Hb_011021_030 Hb_000208_290 Hb_000208_290 Hb_005867_080--Hb_000208_290 Hb_004156_060 Hb_004156_060 Hb_005867_080--Hb_004156_060 Hb_004460_020 Hb_004460_020 Hb_001767_020--Hb_004460_020 Hb_041774_010 Hb_041774_010 Hb_001767_020--Hb_041774_010 Hb_001668_030 Hb_001668_030 Hb_001767_020--Hb_001668_030 Hb_001775_040 Hb_001775_040 Hb_001767_020--Hb_001775_040 Hb_008147_030 Hb_008147_030 Hb_001767_020--Hb_008147_030 Hb_000457_160 Hb_000457_160 Hb_005656_060--Hb_000457_160 Hb_022288_020 Hb_022288_020 Hb_005656_060--Hb_022288_020 Hb_005656_060--Hb_041774_010 Hb_005656_060--Hb_001767_020 Hb_010317_030 Hb_010317_030 Hb_005656_060--Hb_010317_030 Hb_172256_010 Hb_172256_010 Hb_004102_130--Hb_172256_010 Hb_000016_180 Hb_000016_180 Hb_004102_130--Hb_000016_180 Hb_003673_020 Hb_003673_020 Hb_004102_130--Hb_003673_020 Hb_000211_080 Hb_000211_080 Hb_004102_130--Hb_000211_080 Hb_004531_090 Hb_004531_090 Hb_004102_130--Hb_004531_090 Hb_000176_170 Hb_000176_170 Hb_004102_130--Hb_000176_170 Hb_000005_050 Hb_000005_050 Hb_011021_030--Hb_000005_050 Hb_000050_120 Hb_000050_120 Hb_011021_030--Hb_000050_120 Hb_002172_030 Hb_002172_030 Hb_011021_030--Hb_002172_030 Hb_012654_020 Hb_012654_020 Hb_011021_030--Hb_012654_020 Hb_003656_030 Hb_003656_030 Hb_011021_030--Hb_003656_030 Hb_002078_040 Hb_002078_040 Hb_011021_030--Hb_002078_040 Hb_000208_290--Hb_004156_060 Hb_000161_030 Hb_000161_030 Hb_000208_290--Hb_000161_030 Hb_006029_010 Hb_006029_010 Hb_000208_290--Hb_006029_010 Hb_022288_010 Hb_022288_010 Hb_000208_290--Hb_022288_010 Hb_154381_050 Hb_154381_050 Hb_000208_290--Hb_154381_050 Hb_006091_030 Hb_006091_030 Hb_000208_290--Hb_006091_030 Hb_004156_060--Hb_154381_050 Hb_004156_060--Hb_006029_010 Hb_000230_110 Hb_000230_110 Hb_004156_060--Hb_000230_110 Hb_176022_020 Hb_176022_020 Hb_004156_060--Hb_176022_020 Hb_012055_020 Hb_012055_020 Hb_004156_060--Hb_012055_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.53375 0.049301 0.0720853 0.170836 1.87577 2.35758
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.138822 0.084965 1.50772 0.13966 0.0776073

CAGE analysis