Hb_137153_010

Information

Type -
Description -
Location Contig137153: 430-837
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137153_010 0.0 - - -
2 Hb_098466_010 0.1756110837 - - PREDICTED: uncharacterized protein LOC105640954 [Jatropha curcas]
3 Hb_172112_010 0.2549671289 - - hypothetical protein JCGZ_26322 [Jatropha curcas]
4 Hb_041774_010 0.2913811139 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
5 Hb_128287_010 0.3061389722 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
6 Hb_108404_010 0.3064959999 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
7 Hb_000204_180 0.3090103721 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
8 Hb_002673_050 0.3121635556 - - -
9 Hb_091369_010 0.3125464015 - - -
10 Hb_008473_010 0.31273585 - - PREDICTED: laccase-14-like [Jatropha curcas]
11 Hb_000227_110 0.3137126009 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
12 Hb_000944_010 0.314963579 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
13 Hb_003400_030 0.3149855156 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
14 Hb_002400_450 0.3160711101 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
15 Hb_002141_010 0.3163379814 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
16 Hb_000260_190 0.3166553203 - - -
17 Hb_034667_010 0.3176864811 - - -
18 Hb_000322_110 0.3190419127 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Jatropha curcas]
19 Hb_008151_030 0.3193887195 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_010399_020 0.3204631196 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_137153_010 Hb_137153_010 Hb_098466_010 Hb_098466_010 Hb_137153_010--Hb_098466_010 Hb_172112_010 Hb_172112_010 Hb_137153_010--Hb_172112_010 Hb_041774_010 Hb_041774_010 Hb_137153_010--Hb_041774_010 Hb_128287_010 Hb_128287_010 Hb_137153_010--Hb_128287_010 Hb_108404_010 Hb_108404_010 Hb_137153_010--Hb_108404_010 Hb_000204_180 Hb_000204_180 Hb_137153_010--Hb_000204_180 Hb_098466_010--Hb_041774_010 Hb_098466_010--Hb_172112_010 Hb_001767_020 Hb_001767_020 Hb_098466_010--Hb_001767_020 Hb_005656_060 Hb_005656_060 Hb_098466_010--Hb_005656_060 Hb_023323_010 Hb_023323_010 Hb_098466_010--Hb_023323_010 Hb_001650_010 Hb_001650_010 Hb_172112_010--Hb_001650_010 Hb_178607_010 Hb_178607_010 Hb_172112_010--Hb_178607_010 Hb_172112_010--Hb_005656_060 Hb_000060_120 Hb_000060_120 Hb_172112_010--Hb_000060_120 Hb_041774_010--Hb_001767_020 Hb_003073_130 Hb_003073_130 Hb_041774_010--Hb_003073_130 Hb_001668_030 Hb_001668_030 Hb_041774_010--Hb_001668_030 Hb_058884_010 Hb_058884_010 Hb_041774_010--Hb_058884_010 Hb_005867_080 Hb_005867_080 Hb_041774_010--Hb_005867_080 Hb_128287_010--Hb_108404_010 Hb_128287_010--Hb_000204_180 Hb_002673_050 Hb_002673_050 Hb_128287_010--Hb_002673_050 Hb_000227_110 Hb_000227_110 Hb_128287_010--Hb_000227_110 Hb_091369_010 Hb_091369_010 Hb_128287_010--Hb_091369_010 Hb_008473_010 Hb_008473_010 Hb_128287_010--Hb_008473_010 Hb_108404_010--Hb_002673_050 Hb_108404_010--Hb_091369_010 Hb_108404_010--Hb_008473_010 Hb_108404_010--Hb_000204_180 Hb_000944_010 Hb_000944_010 Hb_108404_010--Hb_000944_010 Hb_000204_180--Hb_000227_110 Hb_002141_010 Hb_002141_010 Hb_000204_180--Hb_002141_010 Hb_079543_010 Hb_079543_010 Hb_000204_180--Hb_079543_010 Hb_000362_230 Hb_000362_230 Hb_000204_180--Hb_000362_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.693409 0.448668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.242703 0 0

CAGE analysis