Hb_002141_010

Information

Type -
Description -
Location Contig2141: 1784-3315
Sequence    

Annotation

kegg
ID rcu:RCOM_1470400
description UDP-glucuronosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002514682.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID Q9SGA8
description UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1
trembl
ID B9RLR3
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_1470400 PE=4 SV=1
Gene Ontology
ID GO:0016757
description udp-glycosyltransferase 83a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002141_010 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_000227_110 0.0117365119 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
3 Hb_079543_010 0.028524592 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
4 Hb_000204_180 0.0395498916 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
5 Hb_000362_230 0.0437432438 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_155911_010 0.0559057885 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
7 Hb_001142_020 0.0617759185 - - -
8 Hb_128287_010 0.080846297 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
9 Hb_108404_010 0.0995473259 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
10 Hb_002673_050 0.1477449137 - - -
11 Hb_091369_010 0.1497590662 - - -
12 Hb_008473_010 0.1507341162 - - PREDICTED: laccase-14-like [Jatropha curcas]
13 Hb_000944_010 0.1613180749 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
14 Hb_003400_030 0.1614154266 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
15 Hb_002400_450 0.1660964651 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
16 Hb_000260_190 0.1685141448 - - -
17 Hb_002022_050 0.1721541078 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
18 Hb_034667_010 0.1726301411 - - -
19 Hb_008151_030 0.1790601966 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_002260_190 0.1798136518 - - -

Gene co-expression network

sample Hb_002141_010 Hb_002141_010 Hb_000227_110 Hb_000227_110 Hb_002141_010--Hb_000227_110 Hb_079543_010 Hb_079543_010 Hb_002141_010--Hb_079543_010 Hb_000204_180 Hb_000204_180 Hb_002141_010--Hb_000204_180 Hb_000362_230 Hb_000362_230 Hb_002141_010--Hb_000362_230 Hb_155911_010 Hb_155911_010 Hb_002141_010--Hb_155911_010 Hb_001142_020 Hb_001142_020 Hb_002141_010--Hb_001142_020 Hb_000227_110--Hb_000204_180 Hb_000227_110--Hb_079543_010 Hb_000227_110--Hb_000362_230 Hb_000227_110--Hb_155911_010 Hb_128287_010 Hb_128287_010 Hb_000227_110--Hb_128287_010 Hb_079543_010--Hb_000362_230 Hb_079543_010--Hb_155911_010 Hb_079543_010--Hb_001142_020 Hb_079543_010--Hb_000204_180 Hb_000204_180--Hb_128287_010 Hb_108404_010 Hb_108404_010 Hb_000204_180--Hb_108404_010 Hb_000204_180--Hb_000362_230 Hb_000362_230--Hb_155911_010 Hb_000362_230--Hb_001142_020 Hb_155911_010--Hb_001142_020 Hb_155911_010--Hb_000204_180 Hb_001142_020--Hb_000227_110 Hb_001142_020--Hb_000204_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.16839 0.0718671
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis