Hb_001142_020

Information

Type -
Description -
Location Contig1142: 18763-22249
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001142_020 0.0 - - -
2 Hb_155911_010 0.0058814878 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
3 Hb_000362_230 0.0180595027 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_079543_010 0.0332829011 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
5 Hb_002141_010 0.0617759185 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
6 Hb_000227_110 0.0734852337 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
7 Hb_000204_180 0.101203935 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
8 Hb_002022_050 0.1111659711 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
9 Hb_002260_190 0.1189289825 - - -
10 Hb_128287_010 0.1422887702 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_000005_040 0.1468795171 - - PREDICTED: histone H2B.2 [Jatropha curcas]
12 Hb_108404_010 0.160868783 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
13 Hb_002232_200 0.1814455542 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
14 Hb_002900_060 0.2051864028 - - CI small heat shock protein 2 [Prunus salicina]
15 Hb_002595_100 0.2077947969 - - heat-shock protein, putative [Ricinus communis]
16 Hb_002673_050 0.2086895758 - - -
17 Hb_091369_010 0.210686067 - - -
18 Hb_008473_010 0.2116525142 - - PREDICTED: laccase-14-like [Jatropha curcas]
19 Hb_005730_080 0.2206410154 - - PREDICTED: 17.6 kDa class I heat shock protein-like [Solanum lycopersicum]
20 Hb_000944_010 0.2221408871 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]

Gene co-expression network

sample Hb_001142_020 Hb_001142_020 Hb_155911_010 Hb_155911_010 Hb_001142_020--Hb_155911_010 Hb_000362_230 Hb_000362_230 Hb_001142_020--Hb_000362_230 Hb_079543_010 Hb_079543_010 Hb_001142_020--Hb_079543_010 Hb_002141_010 Hb_002141_010 Hb_001142_020--Hb_002141_010 Hb_000227_110 Hb_000227_110 Hb_001142_020--Hb_000227_110 Hb_000204_180 Hb_000204_180 Hb_001142_020--Hb_000204_180 Hb_155911_010--Hb_000362_230 Hb_155911_010--Hb_079543_010 Hb_155911_010--Hb_002141_010 Hb_155911_010--Hb_000227_110 Hb_155911_010--Hb_000204_180 Hb_000362_230--Hb_079543_010 Hb_000362_230--Hb_002141_010 Hb_000362_230--Hb_000227_110 Hb_000362_230--Hb_000204_180 Hb_079543_010--Hb_002141_010 Hb_079543_010--Hb_000227_110 Hb_079543_010--Hb_000204_180 Hb_002141_010--Hb_000227_110 Hb_002141_010--Hb_000204_180 Hb_000227_110--Hb_000204_180 Hb_128287_010 Hb_128287_010 Hb_000227_110--Hb_128287_010 Hb_000204_180--Hb_128287_010 Hb_108404_010 Hb_108404_010 Hb_000204_180--Hb_108404_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.248367 0.0762245
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis