Hb_010626_020

Information

Type -
Description -
Location Contig10626: 13100-13846
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010626_020 0.0 - - -
2 Hb_000370_010 0.0927551912 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
3 Hb_000544_140 0.1201684863 - - PREDICTED: uncharacterized protein LOC101245866 [Solanum lycopersicum]
4 Hb_030630_010 0.1970895328 - - PREDICTED: uncharacterized protein LOC105786776 [Gossypium raimondii]
5 Hb_000204_200 0.2017015944 - - hypothetical protein VITISV_019818 [Vitis vinifera]
6 Hb_123521_010 0.2255903531 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
7 Hb_009474_010 0.22603776 - - -
8 Hb_007768_030 0.2353170091 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_001650_010 0.2723839499 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
10 Hb_003177_120 0.2880140546 - - PREDICTED: disease resistance protein At4g27190-like [Populus euphratica]
11 Hb_000661_190 0.2919355513 - - PREDICTED: protein spt2-like [Jatropha curcas]
12 Hb_001021_060 0.3181632529 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_005735_010 0.3213325893 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
14 Hb_005914_240 0.3414348625 - - PREDICTED: oxidation resistance protein 1 [Jatropha curcas]
15 Hb_003446_040 0.3437949179 - - -
16 Hb_000211_060 0.3448492755 - - glutathione peroxidase [Populus euphratica]
17 Hb_062482_010 0.3480138936 - - -
18 Hb_140572_010 0.3484452982 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
19 Hb_006344_010 0.3610076499 - - -
20 Hb_008147_010 0.362512425 - - hypothetical protein, partial [Pseudomonas fluorescens]

Gene co-expression network

sample Hb_010626_020 Hb_010626_020 Hb_000370_010 Hb_000370_010 Hb_010626_020--Hb_000370_010 Hb_000544_140 Hb_000544_140 Hb_010626_020--Hb_000544_140 Hb_030630_010 Hb_030630_010 Hb_010626_020--Hb_030630_010 Hb_000204_200 Hb_000204_200 Hb_010626_020--Hb_000204_200 Hb_123521_010 Hb_123521_010 Hb_010626_020--Hb_123521_010 Hb_009474_010 Hb_009474_010 Hb_010626_020--Hb_009474_010 Hb_000370_010--Hb_030630_010 Hb_000370_010--Hb_000204_200 Hb_000370_010--Hb_009474_010 Hb_007768_030 Hb_007768_030 Hb_000370_010--Hb_007768_030 Hb_000661_190 Hb_000661_190 Hb_000370_010--Hb_000661_190 Hb_005735_010 Hb_005735_010 Hb_000544_140--Hb_005735_010 Hb_000544_140--Hb_000370_010 Hb_001650_010 Hb_001650_010 Hb_000544_140--Hb_001650_010 Hb_000544_140--Hb_123521_010 Hb_001021_060 Hb_001021_060 Hb_000544_140--Hb_001021_060 Hb_030630_010--Hb_000204_200 Hb_030630_010--Hb_009474_010 Hb_030630_010--Hb_007768_030 Hb_030630_010--Hb_000661_190 Hb_000211_060 Hb_000211_060 Hb_030630_010--Hb_000211_060 Hb_000204_200--Hb_009474_010 Hb_000204_200--Hb_007768_030 Hb_000204_200--Hb_000661_190 Hb_000204_200--Hb_000211_060 Hb_123521_010--Hb_000370_010 Hb_140572_010 Hb_140572_010 Hb_123521_010--Hb_140572_010 Hb_003446_040 Hb_003446_040 Hb_123521_010--Hb_003446_040 Hb_006344_010 Hb_006344_010 Hb_123521_010--Hb_006344_010 Hb_009474_010--Hb_007768_030 Hb_009474_010--Hb_000661_190 Hb_009474_010--Hb_000211_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 1.13034
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.31052 0 0

CAGE analysis