Hb_130788_010

Information

Type -
Description -
Location Contig130788: 4243-5723
Sequence    

Annotation

kegg
ID pvu:PHAVU_007G250200g
description hypothetical protein
nr
ID XP_012086224.1
description PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
swissprot
ID Q8W4L0
description Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1
trembl
ID A0A067JQC2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21125 PE=4 SV=1
Gene Ontology
ID GO:0005509
description probable calcium-binding protein cml49

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_130788_010 0.0 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
2 Hb_002243_040 0.2202770761 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
3 Hb_013925_010 0.2387423835 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]
4 Hb_003752_050 0.2409603414 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
5 Hb_019654_080 0.2616555324 - - -
6 Hb_005470_010 0.2714550915 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
7 Hb_000160_200 0.274346082 - - PREDICTED: uncharacterized protein LOC105648226 [Jatropha curcas]
8 Hb_001195_390 0.279414511 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
9 Hb_040506_010 0.2928538825 - - protein binding protein, putative [Ricinus communis]
10 Hb_001425_120 0.2942732389 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
11 Hb_063912_010 0.2947079492 - - PREDICTED: elongation factor 1-alpha-like, partial [Cucumis sativus]
12 Hb_005797_050 0.2948464684 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
13 Hb_001993_020 0.2966833647 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
14 Hb_046440_010 0.2967324552 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
15 Hb_012363_010 0.2990382003 - - -
16 Hb_000127_020 0.3009106604 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
17 Hb_184212_010 0.303490922 - - PREDICTED: uncharacterized protein LOC105113658 [Populus euphratica]
18 Hb_007810_060 0.3051692893 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002007_290 0.3073528871 - - -
20 Hb_007545_210 0.3079832724 transcription factor TF Family: C2C2-Dof PREDICTED: cyclic dof factor 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_130788_010 Hb_130788_010 Hb_002243_040 Hb_002243_040 Hb_130788_010--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_130788_010--Hb_013925_010 Hb_003752_050 Hb_003752_050 Hb_130788_010--Hb_003752_050 Hb_019654_080 Hb_019654_080 Hb_130788_010--Hb_019654_080 Hb_005470_010 Hb_005470_010 Hb_130788_010--Hb_005470_010 Hb_000160_200 Hb_000160_200 Hb_130788_010--Hb_000160_200 Hb_001195_390 Hb_001195_390 Hb_002243_040--Hb_001195_390 Hb_002243_040--Hb_005470_010 Hb_002243_040--Hb_000160_200 Hb_046440_010 Hb_046440_010 Hb_002243_040--Hb_046440_010 Hb_001946_280 Hb_001946_280 Hb_002243_040--Hb_001946_280 Hb_116681_010 Hb_116681_010 Hb_013925_010--Hb_116681_010 Hb_013925_010--Hb_001195_390 Hb_001425_120 Hb_001425_120 Hb_013925_010--Hb_001425_120 Hb_013925_010--Hb_002243_040 Hb_007753_020 Hb_007753_020 Hb_013925_010--Hb_007753_020 Hb_012363_010 Hb_012363_010 Hb_003752_050--Hb_012363_010 Hb_003752_050--Hb_019654_080 Hb_003752_050--Hb_046440_010 Hb_003752_050--Hb_001195_390 Hb_000392_390 Hb_000392_390 Hb_003752_050--Hb_000392_390 Hb_006061_010 Hb_006061_010 Hb_019654_080--Hb_006061_010 Hb_019654_080--Hb_000392_390 Hb_003540_130 Hb_003540_130 Hb_019654_080--Hb_003540_130 Hb_001993_020 Hb_001993_020 Hb_019654_080--Hb_001993_020 Hb_000895_040 Hb_000895_040 Hb_005470_010--Hb_000895_040 Hb_040506_010 Hb_040506_010 Hb_005470_010--Hb_040506_010 Hb_000033_060 Hb_000033_060 Hb_005470_010--Hb_000033_060 Hb_072912_010 Hb_072912_010 Hb_005470_010--Hb_072912_010 Hb_002960_120 Hb_002960_120 Hb_005470_010--Hb_002960_120 Hb_009193_130 Hb_009193_130 Hb_005470_010--Hb_009193_130 Hb_114261_010 Hb_114261_010 Hb_000160_200--Hb_114261_010 Hb_000270_500 Hb_000270_500 Hb_000160_200--Hb_000270_500 Hb_000061_040 Hb_000061_040 Hb_000160_200--Hb_000061_040 Hb_000160_200--Hb_116681_010 Hb_004032_080 Hb_004032_080 Hb_000160_200--Hb_004032_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.3238 0.834494 0 0 0.645335 8.48741
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.989836 0.994689 6.97362 0.452937 0

CAGE analysis