Hb_019654_080

Information

Type -
Description -
Location Contig19654: 66213-68566
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019654_080 0.0 - - -
2 Hb_003752_050 0.2041428925 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
3 Hb_006061_010 0.2344365125 - - PREDICTED: phytosulfokines 4-like [Populus euphratica]
4 Hb_130788_010 0.2616555324 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
5 Hb_000392_390 0.2670766883 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_003540_130 0.2772392106 - - -
7 Hb_001993_020 0.2846253869 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
8 Hb_004705_030 0.2915814588 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000548_040 0.2936837874 rubber biosynthesis Gene Name: CPT1 cis-prenyltransferase1 [Hevea brasiliensis]
10 Hb_012363_010 0.3011686343 - - -
11 Hb_043674_060 0.3096493932 - - PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
12 Hb_000735_150 0.3105517766 - - hypothetical protein JCGZ_15322 [Jatropha curcas]
13 Hb_004321_010 0.3152113467 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_027892_010 0.3163430756 transcription factor TF Family: bHLH LMYC1 [Hevea brasiliensis]
15 Hb_124518_010 0.3181422536 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
16 Hb_002139_010 0.3183009992 - - -
17 Hb_143397_010 0.3188165925 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
18 Hb_001004_040 0.319545499 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001425_120 0.3236169486 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
20 Hb_013925_010 0.3255914283 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]

Gene co-expression network

sample Hb_019654_080 Hb_019654_080 Hb_003752_050 Hb_003752_050 Hb_019654_080--Hb_003752_050 Hb_006061_010 Hb_006061_010 Hb_019654_080--Hb_006061_010 Hb_130788_010 Hb_130788_010 Hb_019654_080--Hb_130788_010 Hb_000392_390 Hb_000392_390 Hb_019654_080--Hb_000392_390 Hb_003540_130 Hb_003540_130 Hb_019654_080--Hb_003540_130 Hb_001993_020 Hb_001993_020 Hb_019654_080--Hb_001993_020 Hb_012363_010 Hb_012363_010 Hb_003752_050--Hb_012363_010 Hb_003752_050--Hb_130788_010 Hb_046440_010 Hb_046440_010 Hb_003752_050--Hb_046440_010 Hb_001195_390 Hb_001195_390 Hb_003752_050--Hb_001195_390 Hb_003752_050--Hb_000392_390 Hb_027892_010 Hb_027892_010 Hb_006061_010--Hb_027892_010 Hb_008014_070 Hb_008014_070 Hb_006061_010--Hb_008014_070 Hb_004705_030 Hb_004705_030 Hb_006061_010--Hb_004705_030 Hb_013818_060 Hb_013818_060 Hb_006061_010--Hb_013818_060 Hb_000120_120 Hb_000120_120 Hb_006061_010--Hb_000120_120 Hb_002243_040 Hb_002243_040 Hb_130788_010--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_130788_010--Hb_013925_010 Hb_005470_010 Hb_005470_010 Hb_130788_010--Hb_005470_010 Hb_000160_200 Hb_000160_200 Hb_130788_010--Hb_000160_200 Hb_001903_080 Hb_001903_080 Hb_000392_390--Hb_001903_080 Hb_002139_010 Hb_002139_010 Hb_000392_390--Hb_002139_010 Hb_043674_060 Hb_043674_060 Hb_000392_390--Hb_043674_060 Hb_000160_030 Hb_000160_030 Hb_000392_390--Hb_000160_030 Hb_000590_040 Hb_000590_040 Hb_003540_130--Hb_000590_040 Hb_000483_420 Hb_000483_420 Hb_003540_130--Hb_000483_420 Hb_001004_040 Hb_001004_040 Hb_003540_130--Hb_001004_040 Hb_085863_020 Hb_085863_020 Hb_003540_130--Hb_085863_020 Hb_003747_130 Hb_003747_130 Hb_003540_130--Hb_003747_130 Hb_012662_010 Hb_012662_010 Hb_001993_020--Hb_012662_010 Hb_027751_040 Hb_027751_040 Hb_001993_020--Hb_027751_040 Hb_000002_390 Hb_000002_390 Hb_001993_020--Hb_000002_390 Hb_000500_310 Hb_000500_310 Hb_001993_020--Hb_000500_310 Hb_000523_020 Hb_000523_020 Hb_001993_020--Hb_000523_020 Hb_002477_230 Hb_002477_230 Hb_001993_020--Hb_002477_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.6018 0.180867 0 0.050055 2.23485 3.43439
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.42285 1.71062 21.6748 0.741292 0

CAGE analysis