Hb_001903_080

Information

Type -
Description -
Location Contig1903: 52482-52841
Sequence    

Annotation

kegg
ID pop:POPTR_0001s46380g
description POPTRDRAFT_753664; hypothetical protein
nr
ID XP_012079699.1
description PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
swissprot
ID Q9LT10
description Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1
trembl
ID A0A067KIC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14819 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 18

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001903_080 0.0 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
2 Hb_001902_020 0.2398908323 - - -
3 Hb_011639_070 0.2443713284 - - PREDICTED: uncharacterized protein LOC105636024 isoform X2 [Jatropha curcas]
4 Hb_000392_390 0.2496979716 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_011909_090 0.2509871681 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105633212 [Jatropha curcas]
6 Hb_002498_200 0.2907684825 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
7 Hb_095413_040 0.3191913943 - - -
8 Hb_049438_010 0.3218989998 - - -
9 Hb_017836_010 0.3307630159 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
10 Hb_000926_220 0.3337845552 - - -
11 Hb_040506_010 0.3355914594 - - protein binding protein, putative [Ricinus communis]
12 Hb_008707_030 0.3381531966 - - PREDICTED: uncharacterized protein LOC104447982 [Eucalyptus grandis]
13 Hb_034569_020 0.343825937 - - -
14 Hb_001691_050 0.3453531709 - - -
15 Hb_010402_020 0.349377748 - - PREDICTED: uncharacterized protein LOC104417027 [Eucalyptus grandis]
16 Hb_129067_010 0.3510308171 - - Cytochrome P450 superfamily protein [Theobroma cacao]
17 Hb_007805_020 0.3514673805 - - -
18 Hb_000200_190 0.3531301104 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 15 [Jatropha curcas]
19 Hb_122567_010 0.3542246307 - - -
20 Hb_000094_390 0.3568619012 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Nelumbo nucifera]

Gene co-expression network

sample Hb_001903_080 Hb_001903_080 Hb_001902_020 Hb_001902_020 Hb_001903_080--Hb_001902_020 Hb_011639_070 Hb_011639_070 Hb_001903_080--Hb_011639_070 Hb_000392_390 Hb_000392_390 Hb_001903_080--Hb_000392_390 Hb_011909_090 Hb_011909_090 Hb_001903_080--Hb_011909_090 Hb_002498_200 Hb_002498_200 Hb_001903_080--Hb_002498_200 Hb_095413_040 Hb_095413_040 Hb_001903_080--Hb_095413_040 Hb_001902_020--Hb_011639_070 Hb_143397_010 Hb_143397_010 Hb_001902_020--Hb_143397_010 Hb_001902_020--Hb_002498_200 Hb_008707_030 Hb_008707_030 Hb_001902_020--Hb_008707_030 Hb_001055_040 Hb_001055_040 Hb_001902_020--Hb_001055_040 Hb_000094_390 Hb_000094_390 Hb_011639_070--Hb_000094_390 Hb_001691_050 Hb_001691_050 Hb_011639_070--Hb_001691_050 Hb_040506_010 Hb_040506_010 Hb_011639_070--Hb_040506_010 Hb_000028_630 Hb_000028_630 Hb_011639_070--Hb_000028_630 Hb_000733_040 Hb_000733_040 Hb_011639_070--Hb_000733_040 Hb_019654_080 Hb_019654_080 Hb_000392_390--Hb_019654_080 Hb_003752_050 Hb_003752_050 Hb_000392_390--Hb_003752_050 Hb_002139_010 Hb_002139_010 Hb_000392_390--Hb_002139_010 Hb_043674_060 Hb_043674_060 Hb_000392_390--Hb_043674_060 Hb_000160_030 Hb_000160_030 Hb_000392_390--Hb_000160_030 Hb_011909_090--Hb_002498_200 Hb_122567_010 Hb_122567_010 Hb_011909_090--Hb_122567_010 Hb_003772_080 Hb_003772_080 Hb_011909_090--Hb_003772_080 Hb_019654_120 Hb_019654_120 Hb_011909_090--Hb_019654_120 Hb_001178_120 Hb_001178_120 Hb_011909_090--Hb_001178_120 Hb_049438_010 Hb_049438_010 Hb_002498_200--Hb_049438_010 Hb_002498_200--Hb_095413_040 Hb_002498_200--Hb_122567_010 Hb_017836_010 Hb_017836_010 Hb_002498_200--Hb_017836_010 Hb_000926_220 Hb_000926_220 Hb_002498_200--Hb_000926_220 Hb_095413_040--Hb_017836_010 Hb_095413_040--Hb_049438_010 Hb_095413_040--Hb_000926_220 Hb_003607_030 Hb_003607_030 Hb_095413_040--Hb_003607_030 Hb_009693_040 Hb_009693_040 Hb_095413_040--Hb_009693_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.19705 0.184367 0 0 0.293038 0.0951809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.298587 0 0

CAGE analysis