Hb_017836_010

Information

Type -
Description -
Location Contig17836: 676-1521
Sequence    

Annotation

kegg
ID pop:POPTR_0011s11670g
description POPTRDRAFT_806008; hypothetical protein
nr
ID XP_012065122.1
description PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
swissprot
ID Q84LH3
description Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=1
trembl
ID A0A067L6N6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05559 PE=4 SV=1
Gene Ontology
ID GO:0004527
description werner syndrome-like exonuclease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017836_010 0.0 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
2 Hb_000926_220 0.0113000252 - - -
3 Hb_095413_040 0.07000102 - - -
4 Hb_003607_030 0.1071676106 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor ABI3 [Jatropha curcas]
5 Hb_009693_040 0.1177142259 - - PREDICTED: serine/threonine-protein kinase At3g07070 [Brassica rapa]
6 Hb_007963_050 0.1243657409 - - -
7 Hb_049438_010 0.1454316125 - - -
8 Hb_000953_150 0.189134632 - - -
9 Hb_002498_200 0.1929618939 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
10 Hb_000098_280 0.1956816295 - - PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Jatropha curcas]
11 Hb_080765_020 0.2096515185 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_046727_010 0.2127801513 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
13 Hb_007008_020 0.2327989652 - - -
14 Hb_004466_010 0.2447665154 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
15 Hb_158990_010 0.2462709317 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
16 Hb_000100_050 0.257269702 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
17 Hb_011978_010 0.2579893551 - - hypothetical protein JCGZ_03852 [Jatropha curcas]
18 Hb_000375_380 0.2583392403 - - -
19 Hb_004324_380 0.2617213019 - - -
20 Hb_027393_020 0.2733434982 - - -

Gene co-expression network

sample Hb_017836_010 Hb_017836_010 Hb_000926_220 Hb_000926_220 Hb_017836_010--Hb_000926_220 Hb_095413_040 Hb_095413_040 Hb_017836_010--Hb_095413_040 Hb_003607_030 Hb_003607_030 Hb_017836_010--Hb_003607_030 Hb_009693_040 Hb_009693_040 Hb_017836_010--Hb_009693_040 Hb_007963_050 Hb_007963_050 Hb_017836_010--Hb_007963_050 Hb_049438_010 Hb_049438_010 Hb_017836_010--Hb_049438_010 Hb_000926_220--Hb_095413_040 Hb_000926_220--Hb_003607_030 Hb_000926_220--Hb_009693_040 Hb_000926_220--Hb_007963_050 Hb_000926_220--Hb_049438_010 Hb_095413_040--Hb_049438_010 Hb_002498_200 Hb_002498_200 Hb_095413_040--Hb_002498_200 Hb_095413_040--Hb_003607_030 Hb_095413_040--Hb_009693_040 Hb_003607_030--Hb_009693_040 Hb_003607_030--Hb_007963_050 Hb_000953_150 Hb_000953_150 Hb_003607_030--Hb_000953_150 Hb_000098_280 Hb_000098_280 Hb_003607_030--Hb_000098_280 Hb_080765_020 Hb_080765_020 Hb_003607_030--Hb_080765_020 Hb_009693_040--Hb_007963_050 Hb_009693_040--Hb_000953_150 Hb_009693_040--Hb_000098_280 Hb_009693_040--Hb_080765_020 Hb_046727_010 Hb_046727_010 Hb_009693_040--Hb_046727_010 Hb_007963_050--Hb_000953_150 Hb_007963_050--Hb_000098_280 Hb_007963_050--Hb_080765_020 Hb_007963_050--Hb_046727_010 Hb_049438_010--Hb_002498_200 Hb_000011_030 Hb_000011_030 Hb_049438_010--Hb_000011_030 Hb_000015_110 Hb_000015_110 Hb_049438_010--Hb_000015_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10384 0 0 0 0.0258648 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis