Hb_011639_070

Information

Type -
Description -
Location Contig11639: 65990-67630
Sequence    

Annotation

kegg
ID rcu:RCOM_0818110
description hypothetical protein
nr
ID XP_012074588.1
description PREDICTED: uncharacterized protein LOC105636024 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVR2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09926 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011639_070 0.0 - - PREDICTED: uncharacterized protein LOC105636024 isoform X2 [Jatropha curcas]
2 Hb_000094_390 0.1928924525 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Nelumbo nucifera]
3 Hb_001691_050 0.2069699737 - - -
4 Hb_040506_010 0.2339506983 - - protein binding protein, putative [Ricinus communis]
5 Hb_000028_630 0.2405541489 - - PIN-like protein, partial [Selaginella apoda]
6 Hb_001903_080 0.2443713284 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
7 Hb_000733_040 0.2476648291 - - hypothetical protein POPTR_0010s20310g [Populus trichocarpa]
8 Hb_001178_120 0.2492944979 - - non-ltr retroelement reverse transcriptase [Rosa rugosa]
9 Hb_000395_100 0.2542378045 - - Protein MYG1, putative [Ricinus communis]
10 Hb_129067_010 0.2609906901 - - Cytochrome P450 superfamily protein [Theobroma cacao]
11 Hb_158990_010 0.2623331166 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_032264_130 0.2647106315 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
13 Hb_001902_020 0.2660724005 - - -
14 Hb_000605_010 0.277596888 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
15 Hb_073212_010 0.2783521746 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
16 Hb_000153_020 0.2831543432 - - conserved hypothetical protein [Ricinus communis]
17 Hb_088542_010 0.2839192057 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
18 Hb_000186_100 0.284670514 - - PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas]
19 Hb_008707_030 0.2851382285 - - PREDICTED: uncharacterized protein LOC104447982 [Eucalyptus grandis]
20 Hb_007634_020 0.2860109635 - - -

Gene co-expression network

sample Hb_011639_070 Hb_011639_070 Hb_000094_390 Hb_000094_390 Hb_011639_070--Hb_000094_390 Hb_001691_050 Hb_001691_050 Hb_011639_070--Hb_001691_050 Hb_040506_010 Hb_040506_010 Hb_011639_070--Hb_040506_010 Hb_000028_630 Hb_000028_630 Hb_011639_070--Hb_000028_630 Hb_001903_080 Hb_001903_080 Hb_011639_070--Hb_001903_080 Hb_000733_040 Hb_000733_040 Hb_011639_070--Hb_000733_040 Hb_001178_120 Hb_001178_120 Hb_000094_390--Hb_001178_120 Hb_000153_020 Hb_000153_020 Hb_000094_390--Hb_000153_020 Hb_001892_160 Hb_001892_160 Hb_000094_390--Hb_001892_160 Hb_158990_010 Hb_158990_010 Hb_000094_390--Hb_158990_010 Hb_005539_320 Hb_005539_320 Hb_000094_390--Hb_005539_320 Hb_177627_010 Hb_177627_010 Hb_000094_390--Hb_177627_010 Hb_073212_010 Hb_073212_010 Hb_001691_050--Hb_073212_010 Hb_002493_030 Hb_002493_030 Hb_001691_050--Hb_002493_030 Hb_088542_010 Hb_088542_010 Hb_001691_050--Hb_088542_010 Hb_043655_010 Hb_043655_010 Hb_001691_050--Hb_043655_010 Hb_007634_020 Hb_007634_020 Hb_001691_050--Hb_007634_020 Hb_002232_290 Hb_002232_290 Hb_001691_050--Hb_002232_290 Hb_000186_100 Hb_000186_100 Hb_040506_010--Hb_000186_100 Hb_005470_010 Hb_005470_010 Hb_040506_010--Hb_005470_010 Hb_007382_040 Hb_007382_040 Hb_040506_010--Hb_007382_040 Hb_040506_010--Hb_000733_040 Hb_004307_040 Hb_004307_040 Hb_040506_010--Hb_004307_040 Hb_000895_040 Hb_000895_040 Hb_040506_010--Hb_000895_040 Hb_000028_630--Hb_000094_390 Hb_000028_630--Hb_001691_050 Hb_002234_220 Hb_002234_220 Hb_000028_630--Hb_002234_220 Hb_000028_630--Hb_000733_040 Hb_000028_630--Hb_007634_020 Hb_000028_630--Hb_073212_010 Hb_001902_020 Hb_001902_020 Hb_001903_080--Hb_001902_020 Hb_000392_390 Hb_000392_390 Hb_001903_080--Hb_000392_390 Hb_011909_090 Hb_011909_090 Hb_001903_080--Hb_011909_090 Hb_002498_200 Hb_002498_200 Hb_001903_080--Hb_002498_200 Hb_095413_040 Hb_095413_040 Hb_001903_080--Hb_095413_040 Hb_129067_010 Hb_129067_010 Hb_000733_040--Hb_129067_010 Hb_000733_040--Hb_088542_010 Hb_089140_060 Hb_089140_060 Hb_000733_040--Hb_089140_060 Hb_000733_040--Hb_073212_010 Hb_000733_040--Hb_001691_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.8078 0.116475 0 0 3.4663 2.36313
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.7708 0.337702 0

CAGE analysis