Hb_011909_090

Information

Type transcription factor
Description TF Family: NOZZLE
Location Contig11909: 83902-85663
Sequence    

Annotation

kegg
ID rcu:RCOM_1256180
description hypothetical protein
nr
ID XP_012071183.1
description PREDICTED: uncharacterized protein LOC105633212 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KRW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00723 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011909_090 0.0 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105633212 [Jatropha curcas]
2 Hb_002498_200 0.2215477522 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
3 Hb_122567_010 0.223362837 - - -
4 Hb_003772_080 0.2472317684 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
5 Hb_001903_080 0.2509871681 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
6 Hb_019654_120 0.2760052943 - - PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
7 Hb_001178_120 0.2782118837 - - non-ltr retroelement reverse transcriptase [Rosa rugosa]
8 Hb_178389_010 0.2827062649 - - PREDICTED: U-box domain-containing protein 15-like isoform X2 [Jatropha curcas]
9 Hb_075481_010 0.2912220764 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
10 Hb_010770_010 0.2928183594 - - -
11 Hb_158990_010 0.2942484897 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_049014_010 0.2945625872 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
13 Hb_005539_300 0.3009923867 - - PREDICTED: deacetoxyvindoline 4-hydroxylase-like [Populus euphratica]
14 Hb_000071_200 0.3028653119 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
15 Hb_049438_010 0.3057256525 - - -
16 Hb_001217_060 0.3064328215 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
17 Hb_095413_040 0.3076610198 - - -
18 Hb_005539_320 0.3098886381 - - PREDICTED: pumilio homolog 15-like [Vitis vinifera]
19 Hb_011639_070 0.3106244546 - - PREDICTED: uncharacterized protein LOC105636024 isoform X2 [Jatropha curcas]
20 Hb_101040_010 0.31276217 - - -

Gene co-expression network

sample Hb_011909_090 Hb_011909_090 Hb_002498_200 Hb_002498_200 Hb_011909_090--Hb_002498_200 Hb_122567_010 Hb_122567_010 Hb_011909_090--Hb_122567_010 Hb_003772_080 Hb_003772_080 Hb_011909_090--Hb_003772_080 Hb_001903_080 Hb_001903_080 Hb_011909_090--Hb_001903_080 Hb_019654_120 Hb_019654_120 Hb_011909_090--Hb_019654_120 Hb_001178_120 Hb_001178_120 Hb_011909_090--Hb_001178_120 Hb_049438_010 Hb_049438_010 Hb_002498_200--Hb_049438_010 Hb_095413_040 Hb_095413_040 Hb_002498_200--Hb_095413_040 Hb_002498_200--Hb_122567_010 Hb_017836_010 Hb_017836_010 Hb_002498_200--Hb_017836_010 Hb_000926_220 Hb_000926_220 Hb_002498_200--Hb_000926_220 Hb_049014_010 Hb_049014_010 Hb_122567_010--Hb_049014_010 Hb_000656_130 Hb_000656_130 Hb_122567_010--Hb_000656_130 Hb_075481_010 Hb_075481_010 Hb_122567_010--Hb_075481_010 Hb_000454_020 Hb_000454_020 Hb_122567_010--Hb_000454_020 Hb_142068_020 Hb_142068_020 Hb_122567_010--Hb_142068_020 Hb_178389_010 Hb_178389_010 Hb_122567_010--Hb_178389_010 Hb_171659_010 Hb_171659_010 Hb_003772_080--Hb_171659_010 Hb_000317_090 Hb_000317_090 Hb_003772_080--Hb_000317_090 Hb_001276_010 Hb_001276_010 Hb_003772_080--Hb_001276_010 Hb_000559_050 Hb_000559_050 Hb_003772_080--Hb_000559_050 Hb_001589_070 Hb_001589_070 Hb_003772_080--Hb_001589_070 Hb_001902_020 Hb_001902_020 Hb_001903_080--Hb_001902_020 Hb_011639_070 Hb_011639_070 Hb_001903_080--Hb_011639_070 Hb_000392_390 Hb_000392_390 Hb_001903_080--Hb_000392_390 Hb_001903_080--Hb_002498_200 Hb_001903_080--Hb_095413_040 Hb_019654_120--Hb_178389_010 Hb_019654_120--Hb_122567_010 Hb_123104_010 Hb_123104_010 Hb_019654_120--Hb_123104_010 Hb_000395_100 Hb_000395_100 Hb_019654_120--Hb_000395_100 Hb_017111_010 Hb_017111_010 Hb_019654_120--Hb_017111_010 Hb_007467_020 Hb_007467_020 Hb_019654_120--Hb_007467_020 Hb_158990_010 Hb_158990_010 Hb_001178_120--Hb_158990_010 Hb_000153_020 Hb_000153_020 Hb_001178_120--Hb_000153_020 Hb_000094_390 Hb_000094_390 Hb_001178_120--Hb_000094_390 Hb_005539_320 Hb_005539_320 Hb_001178_120--Hb_005539_320 Hb_177627_010 Hb_177627_010 Hb_001178_120--Hb_177627_010 Hb_132629_010 Hb_132629_010 Hb_001178_120--Hb_132629_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.176235 0.0177967 0 0 0.0200243 0.0233877
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis