Hb_123104_010

Information

Type -
Description -
Location Contig123104: 561-1908
Sequence    

Annotation

kegg
ID pda:103715912
description uncharacterized LOC103715912
nr
ID XP_009764284.1
description PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID M5WQG1
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023432mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC104216022, partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123104_010 0.0 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
2 Hb_000186_100 0.2023540079 - - PREDICTED: uncharacterized protein LOC105649284 isoform X1 [Jatropha curcas]
3 Hb_000313_320 0.2270276189 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
4 Hb_002307_050 0.2308445908 - - PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Jatropha curcas]
5 Hb_017111_010 0.2309599258 - - PREDICTED: inositol transporter 4 [Jatropha curcas]
6 Hb_000101_180 0.2388137609 - - -
7 Hb_002007_290 0.2401314443 - - -
8 Hb_005797_050 0.2407375982 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
9 Hb_019654_120 0.2426694301 - - PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
10 Hb_007545_210 0.2470169269 transcription factor TF Family: C2C2-Dof PREDICTED: cyclic dof factor 3-like [Jatropha curcas]
11 Hb_002477_230 0.2594288597 - - PREDICTED: verprolin [Jatropha curcas]
12 Hb_007741_170 0.2604226912 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT4-like [Jatropha curcas]
13 Hb_002094_020 0.2609264299 - - PREDICTED: alpha-copaene synthase-like [Jatropha curcas]
14 Hb_000046_410 0.2612872002 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
15 Hb_002388_060 0.2615422002 - - conserved hypothetical protein [Ricinus communis]
16 Hb_032264_130 0.2615453697 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
17 Hb_008707_030 0.2721143002 - - PREDICTED: uncharacterized protein LOC104447982 [Eucalyptus grandis]
18 Hb_001230_010 0.2735596096 - - -
19 Hb_001993_020 0.2773210401 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
20 Hb_178389_010 0.2776485763 - - PREDICTED: U-box domain-containing protein 15-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_123104_010 Hb_123104_010 Hb_000186_100 Hb_000186_100 Hb_123104_010--Hb_000186_100 Hb_000313_320 Hb_000313_320 Hb_123104_010--Hb_000313_320 Hb_002307_050 Hb_002307_050 Hb_123104_010--Hb_002307_050 Hb_017111_010 Hb_017111_010 Hb_123104_010--Hb_017111_010 Hb_000101_180 Hb_000101_180 Hb_123104_010--Hb_000101_180 Hb_002007_290 Hb_002007_290 Hb_123104_010--Hb_002007_290 Hb_000186_100--Hb_017111_010 Hb_002388_060 Hb_002388_060 Hb_000186_100--Hb_002388_060 Hb_007545_210 Hb_007545_210 Hb_000186_100--Hb_007545_210 Hb_040506_010 Hb_040506_010 Hb_000186_100--Hb_040506_010 Hb_003687_200 Hb_003687_200 Hb_000186_100--Hb_003687_200 Hb_032264_130 Hb_032264_130 Hb_000186_100--Hb_032264_130 Hb_095471_010 Hb_095471_010 Hb_000313_320--Hb_095471_010 Hb_000313_320--Hb_000186_100 Hb_000313_320--Hb_000101_180 Hb_000258_150 Hb_000258_150 Hb_000313_320--Hb_000258_150 Hb_000313_320--Hb_002388_060 Hb_007741_170 Hb_007741_170 Hb_002307_050--Hb_007741_170 Hb_002078_430 Hb_002078_430 Hb_002307_050--Hb_002078_430 Hb_005298_060 Hb_005298_060 Hb_002307_050--Hb_005298_060 Hb_004137_030 Hb_004137_030 Hb_002307_050--Hb_004137_030 Hb_011609_030 Hb_011609_030 Hb_002307_050--Hb_011609_030 Hb_002619_010 Hb_002619_010 Hb_002307_050--Hb_002619_010 Hb_000523_020 Hb_000523_020 Hb_017111_010--Hb_000523_020 Hb_017111_010--Hb_002388_060 Hb_017111_010--Hb_003687_200 Hb_017111_010--Hb_007545_210 Hb_126669_010 Hb_126669_010 Hb_017111_010--Hb_126669_010 Hb_000101_180--Hb_017111_010 Hb_000101_180--Hb_000186_100 Hb_085892_020 Hb_085892_020 Hb_000101_180--Hb_085892_020 Hb_000605_010 Hb_000605_010 Hb_000101_180--Hb_000605_010 Hb_001230_010 Hb_001230_010 Hb_002007_290--Hb_001230_010 Hb_166786_030 Hb_166786_030 Hb_002007_290--Hb_166786_030 Hb_002094_020 Hb_002094_020 Hb_002007_290--Hb_002094_020 Hb_000928_230 Hb_000928_230 Hb_002007_290--Hb_000928_230 Hb_002007_290--Hb_017111_010 Hb_031862_050 Hb_031862_050 Hb_002007_290--Hb_031862_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.998033 0 0.0638243 0.0136935 0.0973854 0.228498
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0764168 0.0901693 0.0560528 0.0481175 0

CAGE analysis