Hb_002619_010

Information

Type -
Description -
Location Contig2619: 2173-3459
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002619_010 0.0 - - -
2 Hb_000714_020 0.0894672618 - - PREDICTED: uncharacterized protein LOC105635336 [Jatropha curcas]
3 Hb_004137_030 0.0927815921 - - conserved hypothetical protein [Ricinus communis]
4 Hb_073973_170 0.1011128012 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
5 Hb_004374_010 0.1033987331 - - PREDICTED: PIN2/TERF1-interacting telomerase inhibitor 1 [Jatropha curcas]
6 Hb_005741_020 0.1048854748 - - PREDICTED: putative golgin subfamily A member 6-like protein 6 [Jatropha curcas]
7 Hb_000590_090 0.1064577936 - - PREDICTED: sulfate transporter 4.1, chloroplastic-like isoform X1 [Jatropha curcas]
8 Hb_011609_030 0.1101117406 - - conserved hypothetical protein 13 [Hevea brasiliensis]
9 Hb_001623_370 0.1115237775 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001514_020 0.1149485282 - - PREDICTED: protein DCL, chloroplastic-like [Jatropha curcas]
11 Hb_005389_140 0.1203854112 - - Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis]
12 Hb_001956_050 0.1207547116 - - PREDICTED: uncharacterized protein C20orf24 homolog [Jatropha curcas]
13 Hb_001493_100 0.1220995233 - - PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Jatropha curcas]
14 Hb_000768_050 0.1234181416 - - hypothetical protein RCOM_0845740 [Ricinus communis]
15 Hb_001956_120 0.1246860059 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004449_220 0.1248039928 transcription factor TF Family: C2H2 PREDICTED: uncharacterized zinc finger protein At4g06634 [Jatropha curcas]
17 Hb_002043_180 0.1249002462 - - PREDICTED: NADP-specific glutamate dehydrogenase [Jatropha curcas]
18 Hb_000976_270 0.1287321703 - - PREDICTED: uncharacterized protein LOC105646226 [Jatropha curcas]
19 Hb_000265_150 0.1306247476 - - PREDICTED: uncharacterized protein LOC105643541 isoform X1 [Jatropha curcas]
20 Hb_002681_040 0.1308610492 - - PREDICTED: ribosomal RNA-processing protein 8 [Jatropha curcas]

Gene co-expression network

sample Hb_002619_010 Hb_002619_010 Hb_000714_020 Hb_000714_020 Hb_002619_010--Hb_000714_020 Hb_004137_030 Hb_004137_030 Hb_002619_010--Hb_004137_030 Hb_073973_170 Hb_073973_170 Hb_002619_010--Hb_073973_170 Hb_004374_010 Hb_004374_010 Hb_002619_010--Hb_004374_010 Hb_005741_020 Hb_005741_020 Hb_002619_010--Hb_005741_020 Hb_000590_090 Hb_000590_090 Hb_002619_010--Hb_000590_090 Hb_011609_030 Hb_011609_030 Hb_000714_020--Hb_011609_030 Hb_001623_370 Hb_001623_370 Hb_000714_020--Hb_001623_370 Hb_001493_100 Hb_001493_100 Hb_000714_020--Hb_001493_100 Hb_001514_020 Hb_001514_020 Hb_000714_020--Hb_001514_020 Hb_000714_020--Hb_004374_010 Hb_004137_030--Hb_073973_170 Hb_004137_030--Hb_001623_370 Hb_004137_030--Hb_000714_020 Hb_004994_310 Hb_004994_310 Hb_004137_030--Hb_004994_310 Hb_001956_050 Hb_001956_050 Hb_004137_030--Hb_001956_050 Hb_073973_170--Hb_001956_050 Hb_073973_170--Hb_000714_020 Hb_001405_050 Hb_001405_050 Hb_073973_170--Hb_001405_050 Hb_027380_040 Hb_027380_040 Hb_073973_170--Hb_027380_040 Hb_001956_120 Hb_001956_120 Hb_004374_010--Hb_001956_120 Hb_000015_010 Hb_000015_010 Hb_004374_010--Hb_000015_010 Hb_000062_230 Hb_000062_230 Hb_004374_010--Hb_000062_230 Hb_017098_030 Hb_017098_030 Hb_004374_010--Hb_017098_030 Hb_002044_090 Hb_002044_090 Hb_004374_010--Hb_002044_090 Hb_011537_040 Hb_011537_040 Hb_004374_010--Hb_011537_040 Hb_005271_070 Hb_005271_070 Hb_005741_020--Hb_005271_070 Hb_005741_020--Hb_001623_370 Hb_005741_020--Hb_011609_030 Hb_005741_020--Hb_000714_020 Hb_005741_020--Hb_001956_120 Hb_004232_010 Hb_004232_010 Hb_005741_020--Hb_004232_010 Hb_005389_140 Hb_005389_140 Hb_000590_090--Hb_005389_140 Hb_001386_130 Hb_001386_130 Hb_000590_090--Hb_001386_130 Hb_000680_150 Hb_000680_150 Hb_000590_090--Hb_000680_150 Hb_000590_090--Hb_000714_020 Hb_001454_390 Hb_001454_390 Hb_000590_090--Hb_001454_390 Hb_005714_040 Hb_005714_040 Hb_000590_090--Hb_005714_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.5118 3.38432 3.65722 0.801403 9.79679 12.1747
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.6979 7.85797 4.40218 2.67364 1.82678

CAGE analysis