Hb_003752_050

Information

Type -
Description -
Location Contig3752: 64963-67452
Sequence    

Annotation

kegg
ID rcu:RCOM_1627870
description hypothetical protein
nr
ID KDP45213.1
description hypothetical protein JCGZ_15078 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15078 PE=4 SV=1
Gene Ontology
ID GO:0016301
description protein kinase us3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003752_050 0.0 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
2 Hb_012363_010 0.1930859739 - - -
3 Hb_019654_080 0.2041428925 - - -
4 Hb_130788_010 0.2409603414 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
5 Hb_046440_010 0.2704620647 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
6 Hb_001195_390 0.2726665797 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
7 Hb_000392_390 0.2762442068 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
8 Hb_013925_010 0.2812977337 - - RecName: Full=Pro-hevein; AltName: Full=Major hevein; Contains: RecName: Full=Hevein; AltName: Allergen=Hev b 6; Contains: RecName: Full=Win-like protein; Flags: Precursor [Hevea brasiliensis]
9 Hb_004321_010 0.2886970437 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_002243_040 0.2895638498 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
11 Hb_003540_130 0.2953749901 - - -
12 Hb_002139_010 0.2960232617 - - -
13 Hb_001009_130 0.3033010462 - - hypothetical protein JCGZ_11336 [Jatropha curcas]
14 Hb_000326_030 0.3045366895 - - hypothetical protein PRUPE_ppa013909mg [Prunus persica]
15 Hb_135624_010 0.3245883083 - - PREDICTED: inositol transporter 4-like [Jatropha curcas]
16 Hb_027028_030 0.3291398896 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001004_040 0.3298208362 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000042_190 0.3363209815 - - conserved hypothetical protein [Ricinus communis]
19 Hb_011639_060 0.3409728338 - - Oligopeptide transporter, putative [Ricinus communis]
20 Hb_129067_010 0.3482492687 - - Cytochrome P450 superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_003752_050 Hb_003752_050 Hb_012363_010 Hb_012363_010 Hb_003752_050--Hb_012363_010 Hb_019654_080 Hb_019654_080 Hb_003752_050--Hb_019654_080 Hb_130788_010 Hb_130788_010 Hb_003752_050--Hb_130788_010 Hb_046440_010 Hb_046440_010 Hb_003752_050--Hb_046440_010 Hb_001195_390 Hb_001195_390 Hb_003752_050--Hb_001195_390 Hb_000392_390 Hb_000392_390 Hb_003752_050--Hb_000392_390 Hb_012363_010--Hb_130788_010 Hb_012363_010--Hb_019654_080 Hb_012363_010--Hb_000392_390 Hb_002139_010 Hb_002139_010 Hb_012363_010--Hb_002139_010 Hb_000042_190 Hb_000042_190 Hb_012363_010--Hb_000042_190 Hb_006061_010 Hb_006061_010 Hb_019654_080--Hb_006061_010 Hb_019654_080--Hb_130788_010 Hb_019654_080--Hb_000392_390 Hb_003540_130 Hb_003540_130 Hb_019654_080--Hb_003540_130 Hb_001993_020 Hb_001993_020 Hb_019654_080--Hb_001993_020 Hb_002243_040 Hb_002243_040 Hb_130788_010--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_130788_010--Hb_013925_010 Hb_005470_010 Hb_005470_010 Hb_130788_010--Hb_005470_010 Hb_000160_200 Hb_000160_200 Hb_130788_010--Hb_000160_200 Hb_000943_030 Hb_000943_030 Hb_046440_010--Hb_000943_030 Hb_000415_060 Hb_000415_060 Hb_046440_010--Hb_000415_060 Hb_005723_040 Hb_005723_040 Hb_046440_010--Hb_005723_040 Hb_046440_010--Hb_002243_040 Hb_000326_030 Hb_000326_030 Hb_046440_010--Hb_000326_030 Hb_000397_100 Hb_000397_100 Hb_046440_010--Hb_000397_100 Hb_001195_390--Hb_002243_040 Hb_001195_390--Hb_013925_010 Hb_006344_010 Hb_006344_010 Hb_001195_390--Hb_006344_010 Hb_140572_010 Hb_140572_010 Hb_001195_390--Hb_140572_010 Hb_001195_390--Hb_046440_010 Hb_001195_390--Hb_000160_200 Hb_001903_080 Hb_001903_080 Hb_000392_390--Hb_001903_080 Hb_000392_390--Hb_002139_010 Hb_043674_060 Hb_043674_060 Hb_000392_390--Hb_043674_060 Hb_000160_030 Hb_000160_030 Hb_000392_390--Hb_000160_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.612 0.358338 0.268223 0.175458 0.285986 4.50771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.381593 0.627678 13.8439 2.33423 0.170591

CAGE analysis