Hb_000397_100

Information

Type -
Description -
Location Contig397: 228209-228532
Sequence    

Annotation

kegg
ID rcu:RCOM_1372180
description hypothetical protein
nr
ID ADR71309.1
description hypothetical protein 31 [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID I3NMS2
description Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000397_100 0.0 - - hypothetical protein 31 [Hevea brasiliensis]
2 Hb_000943_030 0.1646852357 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005211_160 0.1713349538 - - Protein PNS1, putative [Ricinus communis]
4 Hb_000792_090 0.1793402986 - - 3-beta-hydroxy-delta5-steroid dehydrogenase, putative [Ricinus communis]
5 Hb_032215_050 0.1859522793 - - Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis]
6 Hb_000928_020 0.1887977759 - - hypothetical protein CICLE_v10013682mg [Citrus clementina]
7 Hb_000031_030 0.1894347778 - - PREDICTED: plasma membrane ATPase 4 [Jatropha curcas]
8 Hb_181810_020 0.1898127838 - - -
9 Hb_002326_050 0.1994952818 - - PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
10 Hb_000031_150 0.2002051278 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
11 Hb_005976_050 0.2017530896 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
12 Hb_009646_040 0.202120447 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_170193_010 0.2027491865 - - JHL25H03.10 [Jatropha curcas]
14 Hb_000933_060 0.2059625652 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000397_120 0.2065357664 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
16 Hb_001433_220 0.2093688907 - - protein phosphatase, putative [Ricinus communis]
17 Hb_002299_060 0.210286952 transcription factor TF Family: FAR1 PREDICTED: probable receptor-like protein kinase At2g39360 [Jatropha curcas]
18 Hb_000069_170 0.2104519712 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
19 Hb_017110_010 0.210864577 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g55760 [Jatropha curcas]
20 Hb_000629_120 0.2126264279 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_000397_100 Hb_000397_100 Hb_000943_030 Hb_000943_030 Hb_000397_100--Hb_000943_030 Hb_005211_160 Hb_005211_160 Hb_000397_100--Hb_005211_160 Hb_000792_090 Hb_000792_090 Hb_000397_100--Hb_000792_090 Hb_032215_050 Hb_032215_050 Hb_000397_100--Hb_032215_050 Hb_000928_020 Hb_000928_020 Hb_000397_100--Hb_000928_020 Hb_000031_030 Hb_000031_030 Hb_000397_100--Hb_000031_030 Hb_003106_010 Hb_003106_010 Hb_000943_030--Hb_003106_010 Hb_000943_030--Hb_005211_160 Hb_000943_030--Hb_000031_030 Hb_000258_080 Hb_000258_080 Hb_000943_030--Hb_000258_080 Hb_002326_050 Hb_002326_050 Hb_000943_030--Hb_002326_050 Hb_000139_380 Hb_000139_380 Hb_005211_160--Hb_000139_380 Hb_170193_010 Hb_170193_010 Hb_005211_160--Hb_170193_010 Hb_000041_150 Hb_000041_150 Hb_005211_160--Hb_000041_150 Hb_127003_010 Hb_127003_010 Hb_005211_160--Hb_127003_010 Hb_085863_020 Hb_085863_020 Hb_005211_160--Hb_085863_020 Hb_000080_190 Hb_000080_190 Hb_005211_160--Hb_000080_190 Hb_000162_260 Hb_000162_260 Hb_000792_090--Hb_000162_260 Hb_005695_120 Hb_005695_120 Hb_000792_090--Hb_005695_120 Hb_003470_090 Hb_003470_090 Hb_000792_090--Hb_003470_090 Hb_000125_080 Hb_000125_080 Hb_000792_090--Hb_000125_080 Hb_001699_100 Hb_001699_100 Hb_000792_090--Hb_001699_100 Hb_000130_050 Hb_000130_050 Hb_000792_090--Hb_000130_050 Hb_003943_040 Hb_003943_040 Hb_032215_050--Hb_003943_040 Hb_032215_050--Hb_000080_190 Hb_003206_070 Hb_003206_070 Hb_032215_050--Hb_003206_070 Hb_002903_090 Hb_002903_090 Hb_032215_050--Hb_002903_090 Hb_004724_420 Hb_004724_420 Hb_032215_050--Hb_004724_420 Hb_002687_110 Hb_002687_110 Hb_032215_050--Hb_002687_110 Hb_000096_010 Hb_000096_010 Hb_000928_020--Hb_000096_010 Hb_004046_020 Hb_004046_020 Hb_000928_020--Hb_004046_020 Hb_000928_020--Hb_003206_070 Hb_000749_220 Hb_000749_220 Hb_000928_020--Hb_000749_220 Hb_000138_110 Hb_000138_110 Hb_000928_020--Hb_000138_110 Hb_003177_030 Hb_003177_030 Hb_000928_020--Hb_003177_030 Hb_000364_010 Hb_000364_010 Hb_000031_030--Hb_000364_010 Hb_000204_040 Hb_000204_040 Hb_000031_030--Hb_000204_040 Hb_008511_050 Hb_008511_050 Hb_000031_030--Hb_008511_050 Hb_000236_250 Hb_000236_250 Hb_000031_030--Hb_000236_250 Hb_071736_010 Hb_071736_010 Hb_000031_030--Hb_071736_010 Hb_006487_050 Hb_006487_050 Hb_000031_030--Hb_006487_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
90.5769 12.0002 16.2063 101.991 33.2741 102.444
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.9229 29.0806 134.982 26.8427 9.44191

CAGE analysis