Hb_002326_050

Information

Type -
Description -
Location Contig2326: 62139-64901
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001004mg
description hypothetical protein
nr
ID XP_012071728.1
description PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
swissprot
ID Q8LGM7
description Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1
trembl
ID A0A067L2S9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04339 PE=4 SV=1
Gene Ontology
ID GO:0016740
description pyridoxal phosphate-dependent transferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24463: 63796-64082 , PASA_asmbl_24464: 64420-64626
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002326_050 0.0 - - PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
2 Hb_011287_090 0.1264297365 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
3 Hb_000077_130 0.1491585545 - - PREDICTED: callose synthase 12 [Jatropha curcas]
4 Hb_003106_010 0.1507817561 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
5 Hb_185467_020 0.1541821083 - - Cucumisin precursor, putative [Ricinus communis]
6 Hb_170193_010 0.155236652 - - JHL25H03.10 [Jatropha curcas]
7 Hb_127003_010 0.1558729965 - - PREDICTED: uncharacterized protein LOC105633613 [Jatropha curcas]
8 Hb_000836_630 0.1566982263 - - PREDICTED: WD repeat-containing protein 44 [Jatropha curcas]
9 Hb_000139_380 0.159315847 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000236_250 0.1602536815 - - conserved hypothetical protein [Ricinus communis]
11 Hb_008453_150 0.1605986887 - - PREDICTED: uncharacterized protein LOC105635307 isoform X2 [Jatropha curcas]
12 Hb_003030_020 0.162240516 - - PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
13 Hb_011639_050 0.1644882976 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001433_220 0.165405848 - - protein phosphatase, putative [Ricinus communis]
15 Hb_000497_140 0.1656654682 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
16 Hb_006935_050 0.1663474576 - - PREDICTED: probable glutathione peroxidase 2 [Populus euphratica]
17 Hb_000031_030 0.1690393619 - - PREDICTED: plasma membrane ATPase 4 [Jatropha curcas]
18 Hb_002874_070 0.1690722129 - - PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Jatropha curcas]
19 Hb_001946_280 0.1702742737 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000088_040 0.1705688418 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_002326_050 Hb_002326_050 Hb_011287_090 Hb_011287_090 Hb_002326_050--Hb_011287_090 Hb_000077_130 Hb_000077_130 Hb_002326_050--Hb_000077_130 Hb_003106_010 Hb_003106_010 Hb_002326_050--Hb_003106_010 Hb_185467_020 Hb_185467_020 Hb_002326_050--Hb_185467_020 Hb_170193_010 Hb_170193_010 Hb_002326_050--Hb_170193_010 Hb_127003_010 Hb_127003_010 Hb_002326_050--Hb_127003_010 Hb_000049_070 Hb_000049_070 Hb_011287_090--Hb_000049_070 Hb_002874_070 Hb_002874_070 Hb_011287_090--Hb_002874_070 Hb_011287_090--Hb_000077_130 Hb_000139_380 Hb_000139_380 Hb_011287_090--Hb_000139_380 Hb_000236_250 Hb_000236_250 Hb_011287_090--Hb_000236_250 Hb_006935_050 Hb_006935_050 Hb_011287_090--Hb_006935_050 Hb_000497_140 Hb_000497_140 Hb_000077_130--Hb_000497_140 Hb_001584_110 Hb_001584_110 Hb_000077_130--Hb_001584_110 Hb_012055_020 Hb_012055_020 Hb_000077_130--Hb_012055_020 Hb_000077_130--Hb_000236_250 Hb_000077_130--Hb_002874_070 Hb_006091_030 Hb_006091_030 Hb_000077_130--Hb_006091_030 Hb_141939_010 Hb_141939_010 Hb_003106_010--Hb_141939_010 Hb_007064_040 Hb_007064_040 Hb_003106_010--Hb_007064_040 Hb_000836_630 Hb_000836_630 Hb_003106_010--Hb_000836_630 Hb_011639_050 Hb_011639_050 Hb_003106_010--Hb_011639_050 Hb_003106_010--Hb_011287_090 Hb_001946_280 Hb_001946_280 Hb_003106_010--Hb_001946_280 Hb_008453_150 Hb_008453_150 Hb_185467_020--Hb_008453_150 Hb_002631_050 Hb_002631_050 Hb_185467_020--Hb_002631_050 Hb_185467_020--Hb_002874_070 Hb_000803_150 Hb_000803_150 Hb_185467_020--Hb_000803_150 Hb_001936_050 Hb_001936_050 Hb_185467_020--Hb_001936_050 Hb_001981_070 Hb_001981_070 Hb_185467_020--Hb_001981_070 Hb_170193_010--Hb_000139_380 Hb_170193_010--Hb_127003_010 Hb_005211_160 Hb_005211_160 Hb_170193_010--Hb_005211_160 Hb_085863_020 Hb_085863_020 Hb_170193_010--Hb_085863_020 Hb_170193_010--Hb_011287_090 Hb_000041_150 Hb_000041_150 Hb_127003_010--Hb_000041_150 Hb_182424_010 Hb_182424_010 Hb_127003_010--Hb_182424_010 Hb_153258_010 Hb_153258_010 Hb_127003_010--Hb_153258_010 Hb_127003_010--Hb_000139_380 Hb_098993_010 Hb_098993_010 Hb_127003_010--Hb_098993_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.10715 1.29351 1.01717 3.74386 7.43389 13.1435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.36374 3.38164 11.2025 1.33698 1.43538

CAGE analysis