Hb_008453_150

Information

Type -
Description -
Location Contig8453: 98719-101430
Sequence    

Annotation

kegg
ID rcu:RCOM_1598800
description hypothetical protein
nr
ID XP_012073751.1
description PREDICTED: uncharacterized protein LOC105635307 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NTZ0
description JHL20J20.7 protein OS=Jatropha curcas GN=JHL20J20.7 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60226: 99208-100104
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008453_150 0.0 - - PREDICTED: uncharacterized protein LOC105635307 isoform X2 [Jatropha curcas]
2 Hb_185467_020 0.0483193039 - - Cucumisin precursor, putative [Ricinus communis]
3 Hb_002631_050 0.0618391175 - - membrane associated ring finger 1,8, putative [Ricinus communis]
4 Hb_000084_310 0.0714952818 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
5 Hb_001981_070 0.073731374 - - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative [Ricinus communis]
6 Hb_014568_030 0.083791143 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
7 Hb_057183_040 0.0852412834 - - PREDICTED: WPP domain-interacting tail-anchored protein 2 [Jatropha curcas]
8 Hb_000803_150 0.0867203863 - - PREDICTED: uncharacterized protein LOC105648311 isoform X2 [Jatropha curcas]
9 Hb_000017_120 0.0871655786 - - PREDICTED: PIN2/TERF1-interacting telomerase inhibitor 1 [Jatropha curcas]
10 Hb_003297_030 0.0918356874 - - PREDICTED: uncharacterized protein LOC105640530 [Jatropha curcas]
11 Hb_001936_050 0.0939721485 - - PREDICTED: pentatricopeptide repeat-containing protein At4g08210-like [Prunus mume]
12 Hb_003609_040 0.0947960773 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
13 Hb_005754_060 0.0954159996 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001823_100 0.0957489994 - - PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis vinifera]
15 Hb_000576_030 0.0968124577 - - PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Jatropha curcas]
16 Hb_000749_150 0.0977420021 - - -
17 Hb_002874_070 0.0990074561 - - PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Jatropha curcas]
18 Hb_001855_010 0.1038181093 - - PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
19 Hb_000236_250 0.1043544506 - - conserved hypothetical protein [Ricinus communis]
20 Hb_012340_030 0.1044177499 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_008453_150 Hb_008453_150 Hb_185467_020 Hb_185467_020 Hb_008453_150--Hb_185467_020 Hb_002631_050 Hb_002631_050 Hb_008453_150--Hb_002631_050 Hb_000084_310 Hb_000084_310 Hb_008453_150--Hb_000084_310 Hb_001981_070 Hb_001981_070 Hb_008453_150--Hb_001981_070 Hb_014568_030 Hb_014568_030 Hb_008453_150--Hb_014568_030 Hb_057183_040 Hb_057183_040 Hb_008453_150--Hb_057183_040 Hb_185467_020--Hb_002631_050 Hb_002874_070 Hb_002874_070 Hb_185467_020--Hb_002874_070 Hb_000803_150 Hb_000803_150 Hb_185467_020--Hb_000803_150 Hb_001936_050 Hb_001936_050 Hb_185467_020--Hb_001936_050 Hb_185467_020--Hb_001981_070 Hb_000017_120 Hb_000017_120 Hb_002631_050--Hb_000017_120 Hb_000340_510 Hb_000340_510 Hb_002631_050--Hb_000340_510 Hb_000733_060 Hb_000733_060 Hb_002631_050--Hb_000733_060 Hb_022256_040 Hb_022256_040 Hb_002631_050--Hb_022256_040 Hb_000084_310--Hb_002631_050 Hb_000084_310--Hb_001981_070 Hb_000365_360 Hb_000365_360 Hb_000084_310--Hb_000365_360 Hb_168918_020 Hb_168918_020 Hb_000084_310--Hb_168918_020 Hb_000084_310--Hb_185467_020 Hb_000165_030 Hb_000165_030 Hb_001981_070--Hb_000165_030 Hb_001981_070--Hb_002631_050 Hb_004852_030 Hb_004852_030 Hb_001981_070--Hb_004852_030 Hb_000077_050 Hb_000077_050 Hb_014568_030--Hb_000077_050 Hb_001584_110 Hb_001584_110 Hb_014568_030--Hb_001584_110 Hb_002014_080 Hb_002014_080 Hb_014568_030--Hb_002014_080 Hb_024714_030 Hb_024714_030 Hb_014568_030--Hb_024714_030 Hb_001855_010 Hb_001855_010 Hb_014568_030--Hb_001855_010 Hb_011282_030 Hb_011282_030 Hb_014568_030--Hb_011282_030 Hb_000028_470 Hb_000028_470 Hb_057183_040--Hb_000028_470 Hb_001140_200 Hb_001140_200 Hb_057183_040--Hb_001140_200 Hb_001823_100 Hb_001823_100 Hb_057183_040--Hb_001823_100 Hb_000120_240 Hb_000120_240 Hb_057183_040--Hb_000120_240 Hb_003060_070 Hb_003060_070 Hb_057183_040--Hb_003060_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.75798 1.16505 1.27143 1.69661 6.40385 8.92341
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.65629 4.80459 6.7803 1.77724 1.39654

CAGE analysis