Hb_170193_010

Information

Type -
Description -
Location Contig170193: 376-972
Sequence    

Annotation

kegg
ID rcu:RCOM_0897890
description hypothetical protein
nr
ID BAJ53247.1
description JHL25H03.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUD7
description JHL25H03.10 protein OS=Jatropha curcas GN=JHL25H03.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_170193_010 0.0 - - JHL25H03.10 [Jatropha curcas]
2 Hb_000139_380 0.1207181451 - - conserved hypothetical protein [Ricinus communis]
3 Hb_127003_010 0.1274808078 - - PREDICTED: uncharacterized protein LOC105633613 [Jatropha curcas]
4 Hb_005211_160 0.1376739826 - - Protein PNS1, putative [Ricinus communis]
5 Hb_085863_020 0.1454750474 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 1 [Jatropha curcas]
6 Hb_002326_050 0.155236652 - - PREDICTED: uncharacterized protein LOC105633701 [Jatropha curcas]
7 Hb_011287_090 0.1555423511 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
8 Hb_002740_130 0.1587300264 - - PREDICTED: uncharacterized protein LOC105647358 [Jatropha curcas]
9 Hb_182424_010 0.1620548891 - - PREDICTED: U-box domain-containing protein 51 [Jatropha curcas]
10 Hb_000088_040 0.1656237947 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
11 Hb_000025_480 0.1671317145 transcription factor TF Family: HB PREDICTED: homeobox protein 10 isoform X1 [Jatropha curcas]
12 Hb_001004_040 0.167817872 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006935_050 0.1694242581 - - PREDICTED: probable glutathione peroxidase 2 [Populus euphratica]
14 Hb_098993_010 0.1718669201 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
15 Hb_000041_150 0.1753814538 - - Stachyose synthase precursor, putative [Ricinus communis]
16 Hb_001946_280 0.1755707087 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000120_050 0.1768866222 - - PREDICTED: protein ELF4-LIKE 1 [Jatropha curcas]
18 Hb_007943_080 0.1792027701 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
19 Hb_185467_020 0.1844525533 - - Cucumisin precursor, putative [Ricinus communis]
20 Hb_008453_150 0.1857705688 - - PREDICTED: uncharacterized protein LOC105635307 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_170193_010 Hb_170193_010 Hb_000139_380 Hb_000139_380 Hb_170193_010--Hb_000139_380 Hb_127003_010 Hb_127003_010 Hb_170193_010--Hb_127003_010 Hb_005211_160 Hb_005211_160 Hb_170193_010--Hb_005211_160 Hb_085863_020 Hb_085863_020 Hb_170193_010--Hb_085863_020 Hb_002326_050 Hb_002326_050 Hb_170193_010--Hb_002326_050 Hb_011287_090 Hb_011287_090 Hb_170193_010--Hb_011287_090 Hb_006935_050 Hb_006935_050 Hb_000139_380--Hb_006935_050 Hb_098993_010 Hb_098993_010 Hb_000139_380--Hb_098993_010 Hb_000025_480 Hb_000025_480 Hb_000139_380--Hb_000025_480 Hb_000080_190 Hb_000080_190 Hb_000139_380--Hb_000080_190 Hb_000139_380--Hb_011287_090 Hb_005280_010 Hb_005280_010 Hb_000139_380--Hb_005280_010 Hb_000041_150 Hb_000041_150 Hb_127003_010--Hb_000041_150 Hb_182424_010 Hb_182424_010 Hb_127003_010--Hb_182424_010 Hb_153258_010 Hb_153258_010 Hb_127003_010--Hb_153258_010 Hb_127003_010--Hb_000139_380 Hb_127003_010--Hb_098993_010 Hb_005211_160--Hb_000139_380 Hb_005211_160--Hb_000041_150 Hb_005211_160--Hb_127003_010 Hb_005211_160--Hb_085863_020 Hb_005211_160--Hb_000080_190 Hb_022148_010 Hb_022148_010 Hb_085863_020--Hb_022148_010 Hb_085863_020--Hb_000139_380 Hb_085863_020--Hb_127003_010 Hb_001004_040 Hb_001004_040 Hb_085863_020--Hb_001004_040 Hb_085863_020--Hb_011287_090 Hb_002326_050--Hb_011287_090 Hb_000077_130 Hb_000077_130 Hb_002326_050--Hb_000077_130 Hb_003106_010 Hb_003106_010 Hb_002326_050--Hb_003106_010 Hb_185467_020 Hb_185467_020 Hb_002326_050--Hb_185467_020 Hb_002326_050--Hb_127003_010 Hb_000049_070 Hb_000049_070 Hb_011287_090--Hb_000049_070 Hb_002874_070 Hb_002874_070 Hb_011287_090--Hb_002874_070 Hb_011287_090--Hb_000077_130 Hb_000236_250 Hb_000236_250 Hb_011287_090--Hb_000236_250 Hb_011287_090--Hb_006935_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.96997 0.40234 0.446439 1.9642 4.23558 5.59253
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.22079 2.39856 9.22217 2.62383 0.463803

CAGE analysis