Hb_022148_010

Information

Type -
Description -
Location Contig22148: 2820-5585
Sequence    

Annotation

kegg
ID rcu:RCOM_1031760
description hypothetical protein
nr
ID XP_012078198.1
description PREDICTED: uncharacterized protein LOC105638910 [Jatropha curcas]
swissprot
ID Q56YP2
description Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1
trembl
ID A0A067K9L4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12069 PE=4 SV=1
Gene Ontology
ID GO:0016301
description phosphatidylinositol-4-phosphate 5-kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22854: 4028-4270
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022148_010 0.0 - - PREDICTED: uncharacterized protein LOC105638910 [Jatropha curcas]
2 Hb_085863_020 0.1330439997 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 1 [Jatropha curcas]
3 Hb_000291_280 0.1335015228 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
4 Hb_010436_020 0.13400597 - - Dicer-like protein 4 [Morus notabilis]
5 Hb_000122_130 0.1399174932 - - conserved hypothetical protein [Ricinus communis]
6 Hb_010436_030 0.1401039828 - - Ribonuclease III, putative [Ricinus communis]
7 Hb_000139_380 0.1487485333 - - conserved hypothetical protein [Ricinus communis]
8 Hb_049675_010 0.1488801457 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
9 Hb_001226_020 0.1553694379 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Jatropha curcas]
10 Hb_003030_020 0.1562780954 - - PREDICTED: uncharacterized protein LOC105632544 [Jatropha curcas]
11 Hb_034271_030 0.1599962678 - - PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Jatropha curcas]
12 Hb_073452_010 0.1613439192 - - PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X2 [Jatropha curcas]
13 Hb_098993_010 0.1661689445 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
14 Hb_011287_090 0.1665454751 - - PREDICTED: GDP-mannose transporter GONST3-like [Populus euphratica]
15 Hb_012395_190 0.1667964329 - - hypothetical protein B456_005G053800 [Gossypium raimondii]
16 Hb_000086_590 0.1671739787 - - PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Jatropha curcas]
17 Hb_005227_070 0.1704907263 - - serine/threonine protein kinase, putative [Ricinus communis]
18 Hb_189118_010 0.1723605171 - - PREDICTED: extended synaptotagmin-1 [Cucumis melo]
19 Hb_073171_110 0.1726074599 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
20 Hb_012055_020 0.1732984193 - - PREDICTED: metal transporter Nramp3 [Jatropha curcas]

Gene co-expression network

sample Hb_022148_010 Hb_022148_010 Hb_085863_020 Hb_085863_020 Hb_022148_010--Hb_085863_020 Hb_000291_280 Hb_000291_280 Hb_022148_010--Hb_000291_280 Hb_010436_020 Hb_010436_020 Hb_022148_010--Hb_010436_020 Hb_000122_130 Hb_000122_130 Hb_022148_010--Hb_000122_130 Hb_010436_030 Hb_010436_030 Hb_022148_010--Hb_010436_030 Hb_000139_380 Hb_000139_380 Hb_022148_010--Hb_000139_380 Hb_085863_020--Hb_000139_380 Hb_170193_010 Hb_170193_010 Hb_085863_020--Hb_170193_010 Hb_127003_010 Hb_127003_010 Hb_085863_020--Hb_127003_010 Hb_001004_040 Hb_001004_040 Hb_085863_020--Hb_001004_040 Hb_011287_090 Hb_011287_090 Hb_085863_020--Hb_011287_090 Hb_005227_070 Hb_005227_070 Hb_000291_280--Hb_005227_070 Hb_000427_030 Hb_000427_030 Hb_000291_280--Hb_000427_030 Hb_098993_010 Hb_098993_010 Hb_000291_280--Hb_098993_010 Hb_000088_040 Hb_000088_040 Hb_000291_280--Hb_000088_040 Hb_000291_280--Hb_127003_010 Hb_049675_010 Hb_049675_010 Hb_010436_020--Hb_049675_010 Hb_010436_020--Hb_000122_130 Hb_034271_030 Hb_034271_030 Hb_010436_020--Hb_034271_030 Hb_010436_020--Hb_010436_030 Hb_001019_060 Hb_001019_060 Hb_010436_020--Hb_001019_060 Hb_012490_040 Hb_012490_040 Hb_010436_020--Hb_012490_040 Hb_000122_130--Hb_049675_010 Hb_000122_130--Hb_012490_040 Hb_002890_340 Hb_002890_340 Hb_000122_130--Hb_002890_340 Hb_012395_190 Hb_012395_190 Hb_000122_130--Hb_012395_190 Hb_005280_010 Hb_005280_010 Hb_000122_130--Hb_005280_010 Hb_008247_010 Hb_008247_010 Hb_010436_030--Hb_008247_010 Hb_003001_150 Hb_003001_150 Hb_010436_030--Hb_003001_150 Hb_000005_380 Hb_000005_380 Hb_010436_030--Hb_000005_380 Hb_004440_100 Hb_004440_100 Hb_010436_030--Hb_004440_100 Hb_123777_030 Hb_123777_030 Hb_010436_030--Hb_123777_030 Hb_006935_050 Hb_006935_050 Hb_000139_380--Hb_006935_050 Hb_000139_380--Hb_098993_010 Hb_000025_480 Hb_000025_480 Hb_000139_380--Hb_000025_480 Hb_000080_190 Hb_000080_190 Hb_000139_380--Hb_000080_190 Hb_000139_380--Hb_011287_090 Hb_000139_380--Hb_005280_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.4554 2.89706 2.58277 2.75498 25.3829 28.9604
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.13702 9.26155 43.231 12.6238 7.56229

CAGE analysis