Hb_000326_030

Information

Type -
Description -
Location Contig326: 48774-49898
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa013909mg
description hypothetical protein
nr
ID XP_007201452.1
description hypothetical protein PRUPE_ppa013909mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5VP03
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013909mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34297: 48852-49879
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000326_030 0.0 - - hypothetical protein PRUPE_ppa013909mg [Prunus persica]
2 Hb_000347_500 0.1602332102 transcription factor TF Family: GRF conserved hypothetical protein [Ricinus communis]
3 Hb_000415_060 0.1908989659 - - PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas]
4 Hb_001749_010 0.1959799486 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
5 Hb_001606_080 0.2081488225 - - PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X2 [Jatropha curcas]
6 Hb_151628_010 0.2175598194 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
7 Hb_129722_010 0.2325553141 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
8 Hb_000684_240 0.2373746864 - - hypothetical protein RCOM_0819620 [Ricinus communis]
9 Hb_046440_010 0.2410087588 - - hypothetical protein JCGZ_06190 [Jatropha curcas]
10 Hb_026206_020 0.249657997 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X1 [Jatropha curcas]
11 Hb_006698_050 0.254641402 - - Beta-glucosidase, putative [Ricinus communis]
12 Hb_000270_560 0.261779617 - - PREDICTED: U-box domain-containing protein 38-like [Jatropha curcas]
13 Hb_021420_010 0.2620621043 - - hypothetical protein CICLE_v10029508mg [Citrus clementina]
14 Hb_001677_060 0.2645862418 - - PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Jatropha curcas]
15 Hb_001060_110 0.2650125835 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
16 Hb_000061_390 0.2652346038 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
17 Hb_063804_010 0.2672119252 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
18 Hb_000926_020 0.2702709916 - - -
19 Hb_000326_040 0.2716731266 - - hypothetical protein PHAVU_006G187900g [Phaseolus vulgaris]
20 Hb_006649_080 0.2742664987 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]

Gene co-expression network

sample Hb_000326_030 Hb_000326_030 Hb_000347_500 Hb_000347_500 Hb_000326_030--Hb_000347_500 Hb_000415_060 Hb_000415_060 Hb_000326_030--Hb_000415_060 Hb_001749_010 Hb_001749_010 Hb_000326_030--Hb_001749_010 Hb_001606_080 Hb_001606_080 Hb_000326_030--Hb_001606_080 Hb_151628_010 Hb_151628_010 Hb_000326_030--Hb_151628_010 Hb_129722_010 Hb_129722_010 Hb_000326_030--Hb_129722_010 Hb_000347_500--Hb_000415_060 Hb_006698_050 Hb_006698_050 Hb_000347_500--Hb_006698_050 Hb_000939_010 Hb_000939_010 Hb_000347_500--Hb_000939_010 Hb_000270_560 Hb_000270_560 Hb_000347_500--Hb_000270_560 Hb_000347_500--Hb_001749_010 Hb_000028_160 Hb_000028_160 Hb_000415_060--Hb_000028_160 Hb_152079_010 Hb_152079_010 Hb_000415_060--Hb_152079_010 Hb_011030_010 Hb_011030_010 Hb_000415_060--Hb_011030_010 Hb_046931_010 Hb_046931_010 Hb_000415_060--Hb_046931_010 Hb_021420_010 Hb_021420_010 Hb_000415_060--Hb_021420_010 Hb_001749_010--Hb_129722_010 Hb_001749_010--Hb_001606_080 Hb_002735_040 Hb_002735_040 Hb_001749_010--Hb_002735_040 Hb_001749_010--Hb_000415_060 Hb_005976_050 Hb_005976_050 Hb_001606_080--Hb_005976_050 Hb_026206_020 Hb_026206_020 Hb_001606_080--Hb_026206_020 Hb_001366_120 Hb_001366_120 Hb_001606_080--Hb_001366_120 Hb_027402_140 Hb_027402_140 Hb_001606_080--Hb_027402_140 Hb_000365_070 Hb_000365_070 Hb_001606_080--Hb_000365_070 Hb_006649_080 Hb_006649_080 Hb_001606_080--Hb_006649_080 Hb_151628_010--Hb_002735_040 Hb_000392_100 Hb_000392_100 Hb_151628_010--Hb_000392_100 Hb_151628_010--Hb_001749_010 Hb_008707_030 Hb_008707_030 Hb_151628_010--Hb_008707_030 Hb_151628_010--Hb_000347_500 Hb_000453_150 Hb_000453_150 Hb_129722_010--Hb_000453_150 Hb_001481_160 Hb_001481_160 Hb_129722_010--Hb_001481_160 Hb_000157_200 Hb_000157_200 Hb_129722_010--Hb_000157_200 Hb_013726_070 Hb_013726_070 Hb_129722_010--Hb_013726_070 Hb_148121_080 Hb_148121_080 Hb_129722_010--Hb_148121_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
28.5945 7.15398 4.42824 3.65391 0.311443 13.1248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.69832 4.32571 15.3231 6.31332 0.977602

CAGE analysis